Top 10 genes with highest correlation to Rv0680c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1808/PPE32 | (cc=0.4326) | info on Rv1808/PPE32 |
| Rv2715/- | (cc=0.4292) | info on Rv2715/- |
| Rv1020/mfd | (cc=0.4097) | info on Rv1020/mfd |
| Rv0459/- | (cc=0.4017) | info on Rv0459/- |
| Rv2807/- | (cc=0.4004) | info on Rv2807/- |
| Rv1526c/- | (cc=0.3975) | info on Rv1526c/- |
| Rv2005c/- | (cc=0.3963) | info on Rv2005c/- |
| Rv2673/aftC | (cc=0.3899) | info on Rv2673/aftC |
| Rv1809/PPE33 | (cc=0.3894) | info on Rv1809/PPE33 |
| Rv1551/plsB1 | (cc=0.3813) | info on Rv1551/plsB1 |
Correlation of Rv0680c/- with Rv1020/mfd
Normalized LFCs for Rv0680c/-:
(description and provenance of datasets)
| Rv0680c/- | Rv1020/mfd | |
| Fe_supp_jason_reseq | -0.316 | -0.436 |
| low_pH_jason_reseq | -0.587 | -0.097 |
| NO_jason_reseq | -0.045 | -0.221 |
| B6_jason_reseq | -2.402 | -0.783 |
| MHCII_jason_reseq | -2.31 | -1.525 |
| Isoniazid02 | -1.157 | 0.124 |
| Rifampicin4 | -0.774 | -0.079 |
| Ethambutol3 | -0.886 | 0.984 |
| Meropenem3 | -1.205 | 0.317 |
| Vancomycin16 | -0.417 | 0.615 |
| Rv2680_day32 | -0.971 | -0.635 |
| H37Rv_KO_MarP | 0.676 | 0.128 |
| hypoxia_3wks | -0.335 | -1.416 |
| hypoxia_6wks | -1.516 | -1.305 |
| glycerol | -0.886 | 0.794 |
| cholesterol | 2.45 | 0.514 |
| AJ | -1.439 | -0.188 |
| Bibs02 | 1.544 | 0.401 |
| Bibs02c | 1.71 | 0.243 |
| BL6 | 1.016 | 1.214 |
| BL6a | 1.002 | 0.639 |
| BXD01 | -0.609 | 0.377 |
| BXD010 | 0.007 | 0.247 |
| BXD011 | 0.387 | 0.805 |
| BXD03 | -0.657 | 0.716 |
| BXD04 | 0.245 | 0.613 |
| BXD05 | 0.576 | 0.182 |
| BXD06 | 0.35 | 0.967 |
| BXD07 | -0.228 | 0.341 |
| BXD08 | -0.916 | 1.15 |
| BXD09 | 0.154 | 0.418 |
| CAST | -1.281 | 0.486 |
| CCcont | 0.147 | 1.37 |
| DS01 | -0.654 | -0.248 |
| DS02 | -0.039 | -0.454 |
| DS04 | 1.435 | 1.248 |
| DS0c | 0.946 | -0.201 |
| GP01 | 0.426 | 0.878 |
| GP02 | 0.307 | 0.976 |
| GP0c | 1.167 | 0.689 |
| NOD | 2.833 | -0.659 |
| NZO | -2.195 | -0.527 |
| PWK | -0.935 | -0.067 |
| H37Rv_KO_CtpC | 1.71 | 1.15 |
| H37Rv_KO_CtpD | -0.391 | 0.232 |
| H37Rv_KO_Rv1272 | -0.632 | 0.177 |
| H37Rv_KO_SugABC | 1.078 | 0.583 |
| H37Rv_KO_MbtN | 0.108 | 0.263 |
| Trans05 | 0.989 | 0.367 |
| macrophage_unactivated | -1.436 | -0.47 |
| IL1 | 2.159 | 0.219 |
| Rapamycin | 0.509 | 0.252 |
| Tcell | 0.512 | 0.029 |
| GMCSF | -0.676 | -0.42 |
| IFNab | 0.299 | 0.46 |
| IFNg | -0.027 | -0.289 |
| IFNg_GMCSF1 | -0.647 | 0.173 |
| Rv1432_day32 | -1.276 | -0.545 |
| Rv1565c_day32 | -2.515 | -0.123 |
| secA2_input | 0.473 | 0.776 |
| delta_Rv3594 | -0.535 | -0.431 |
| delta_Rv3717 | -0.672 | -0.184 |
| delta_Rv3811 | -0.167 | -0.543 |
| delta_Rv0954 | -0.388 | -0.058 |
| PonA1 | 0.21 | 0.525 |
| EccD1_KO | 0.763 | 0.145 |
| EspI_KO | 0.513 | 0.479 |
| PE35_KO | 0.572 | 0.053 |
| PPE68_KO | 1.072 | 0.195 |
| glycerol2 | -1.588 | -0.069 |
| lignocerate | -0.125 | 0.212 |
| oleate | -0.576 | -0.242 |
| phosphatidylcholine | -0.864 | -0.153 |
| acetate | -0.721 | 0.57 |
| glucAc | -0.187 | 0.361 |
| Rv0950ko | -1.661 | 0.678 |
| Rv1096ko | 0.507 | 0.742 |
| Rv3684ko | 0.177 | 0.593 |
| delta_otsA_trehalose | -0.796 | -0.604 |