Top 10 genes with highest correlation to Rv0680c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1808/PPE32 | (cc=0.4326) | info on Rv1808/PPE32 |
| Rv2715/- | (cc=0.4292) | info on Rv2715/- |
| Rv1020/mfd | (cc=0.4097) | info on Rv1020/mfd |
| Rv0459/- | (cc=0.4017) | info on Rv0459/- |
| Rv2807/- | (cc=0.4004) | info on Rv2807/- |
| Rv1526c/- | (cc=0.3975) | info on Rv1526c/- |
| Rv2005c/- | (cc=0.3963) | info on Rv2005c/- |
| Rv2673/aftC | (cc=0.3899) | info on Rv2673/aftC |
| Rv1809/PPE33 | (cc=0.3894) | info on Rv1809/PPE33 |
| Rv1551/plsB1 | (cc=0.3813) | info on Rv1551/plsB1 |
Correlation of Rv0680c/- with Rv2673/aftC
Normalized LFCs for Rv0680c/-:
(description and provenance of datasets)
| Rv0680c/- | Rv2673/aftC | |
| Fe_supp_jason_reseq | -0.316 | -0.508 |
| low_pH_jason_reseq | -0.587 | -0.201 |
| NO_jason_reseq | -0.045 | -0.483 |
| B6_jason_reseq | -2.402 | -1.314 |
| MHCII_jason_reseq | -2.31 | -1.292 |
| Isoniazid02 | -1.157 | 0.135 |
| Rifampicin4 | -0.774 | 0.0 |
| Ethambutol3 | -0.886 | -0.251 |
| Meropenem3 | -1.205 | -0.12 |
| Vancomycin16 | -0.417 | 0.0 |
| Rv2680_day32 | -0.971 | 0.0 |
| H37Rv_KO_MarP | 0.676 | -0.313 |
| hypoxia_3wks | -0.335 | -0.371 |
| hypoxia_6wks | -1.516 | 0.0 |
| glycerol | -0.886 | -0.353 |
| cholesterol | 2.45 | -0.398 |
| AJ | -1.439 | 0.0 |
| Bibs02 | 1.544 | 0.273 |
| Bibs02c | 1.71 | 0.0 |
| BL6 | 1.016 | 0.351 |
| BL6a | 1.002 | 0.154 |
| BXD01 | -0.609 | 0.365 |
| BXD010 | 0.007 | 0.099 |
| BXD011 | 0.387 | 0.817 |
| BXD03 | -0.657 | 0.536 |
| BXD04 | 0.245 | 0.185 |
| BXD05 | 0.576 | 0.292 |
| BXD06 | 0.35 | 0.374 |
| BXD07 | -0.228 | 0.549 |
| BXD08 | -0.916 | 0.527 |
| BXD09 | 0.154 | 0.477 |
| CAST | -1.281 | -0.192 |
| CCcont | 0.147 | 0.749 |
| DS01 | -0.654 | -0.197 |
| DS02 | -0.039 | -0.38 |
| DS04 | 1.435 | 0.0 |
| DS0c | 0.946 | 0.168 |
| GP01 | 0.426 | -0.271 |
| GP02 | 0.307 | -0.228 |
| GP0c | 1.167 | -0.357 |
| NOD | 2.833 | 1.715 |
| NZO | -2.195 | 0.298 |
| PWK | -0.935 | 0.983 |
| H37Rv_KO_CtpC | 1.71 | 1.582 |
| H37Rv_KO_CtpD | -0.391 | -0.221 |
| H37Rv_KO_Rv1272 | -0.632 | 0.479 |
| H37Rv_KO_SugABC | 1.078 | 0.497 |
| H37Rv_KO_MbtN | 0.108 | 0.0 |
| Trans05 | 0.989 | 1.5 |
| macrophage_unactivated | -1.436 | -1.016 |
| IL1 | 2.159 | -0.219 |
| Rapamycin | 0.509 | -0.718 |
| Tcell | 0.512 | -0.762 |
| GMCSF | -0.676 | -0.401 |
| IFNab | 0.299 | -0.46 |
| IFNg | -0.027 | 0.54 |
| IFNg_GMCSF1 | -0.647 | 0.434 |
| Rv1432_day32 | -1.276 | 0.391 |
| Rv1565c_day32 | -2.515 | 0.0 |
| secA2_input | 0.473 | -0.366 |
| delta_Rv3594 | -0.535 | 0.119 |
| delta_Rv3717 | -0.672 | -0.103 |
| delta_Rv3811 | -0.167 | -0.122 |
| delta_Rv0954 | -0.388 | 0.101 |
| PonA1 | 0.21 | -0.675 |
| EccD1_KO | 0.763 | 1.365 |
| EspI_KO | 0.513 | 0.918 |
| PE35_KO | 0.572 | 1.467 |
| PPE68_KO | 1.072 | 1.872 |
| glycerol2 | -1.588 | -0.914 |
| lignocerate | -0.125 | -0.634 |
| oleate | -0.576 | -1.754 |
| phosphatidylcholine | -0.864 | -0.913 |
| acetate | -0.721 | -1.453 |
| glucAc | -0.187 | -0.605 |
| Rv0950ko | -1.661 | 0.0 |
| Rv1096ko | 0.507 | 0.706 |
| Rv3684ko | 0.177 | 0.0 |
| delta_otsA_trehalose | -0.796 | 0.329 |