Top 10 genes with highest correlation to Rv0675/echA5:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0741/- | (cc=0.4919) | info on Rv0741/- |
| Rv1120c/- | (cc=0.4732) | info on Rv1120c/- |
| Rv3038c/- | (cc=0.4511) | info on Rv3038c/- |
| Rv0113/gmhA | (cc=0.4505) | info on Rv0113/gmhA |
| Rv1734c/- | (cc=0.4447) | info on Rv1734c/- |
| Rv0737/- | (cc=0.4442) | info on Rv0737/- |
| Rv3431c/- | (cc=0.4352) | info on Rv3431c/- |
| Rv3163c/- | (cc=0.4319) | info on Rv3163c/- |
| Rv2174/mptA | (cc=0.4228) | info on Rv2174/mptA |
| Rv0219/- | (cc=0.4194) | info on Rv0219/- |
Correlation of Rv0675/echA5 with Rv3163c/-
Normalized LFCs for Rv0675/echA5:
(description and provenance of datasets)
| Rv0675/echA5 | Rv3163c/- | |
| Fe_supp_jason_reseq | -0.901 | -0.385 |
| low_pH_jason_reseq | -3.001 | -0.325 |
| NO_jason_reseq | 0.541 | -0.113 |
| B6_jason_reseq | -0.342 | -0.465 |
| MHCII_jason_reseq | 2.09 | 0.309 |
| Isoniazid02 | 0.298 | -0.217 |
| Rifampicin4 | 0.263 | -0.214 |
| Ethambutol3 | 0.024 | 0.275 |
| Meropenem3 | -0.315 | 0.932 |
| Vancomycin16 | 0.207 | -0.175 |
| Rv2680_day32 | 0.439 | 1.318 |
| H37Rv_KO_MarP | 0.446 | 0.071 |
| hypoxia_3wks | 0.598 | 0.403 |
| hypoxia_6wks | -0.457 | 0.035 |
| glycerol | -2.319 | 0.62 |
| cholesterol | -2.408 | -0.188 |
| AJ | -1.867 | 0.118 |
| Bibs02 | -2.874 | -0.507 |
| Bibs02c | 1.92 | 0.336 |
| BL6 | -2.205 | -0.497 |
| BL6a | 0.567 | -0.053 |
| BXD01 | -0.443 | 0.709 |
| BXD010 | -0.7 | -0.081 |
| BXD011 | -1.322 | -0.591 |
| BXD03 | -2.126 | -0.591 |
| BXD04 | -1.493 | -1.105 |
| BXD05 | -0.692 | 0.256 |
| BXD06 | -1.612 | -0.213 |
| BXD07 | -1.174 | 0.082 |
| BXD08 | -0.452 | 0.849 |
| BXD09 | -1.881 | -0.313 |
| CAST | 0.759 | -0.102 |
| CCcont | -2.347 | 0.089 |
| DS01 | -0.24 | 0.741 |
| DS02 | 0.239 | 0.35 |
| DS04 | -2.228 | 0.208 |
| DS0c | 0.0 | 0.366 |
| GP01 | -1.393 | -0.157 |
| GP02 | 1.173 | 0.96 |
| GP0c | -1.159 | -0.812 |
| NOD | -0.763 | -0.475 |
| NZO | -1.296 | -0.259 |
| PWK | -0.374 | 0.226 |
| H37Rv_KO_CtpC | -1.056 | 0.274 |
| H37Rv_KO_CtpD | 0.204 | 0.389 |
| H37Rv_KO_Rv1272 | -2.486 | 0.012 |
| H37Rv_KO_SugABC | -1.647 | 0.579 |
| H37Rv_KO_MbtN | -0.35 | 0.555 |
| Trans05 | -2.172 | -1.041 |
| macrophage_unactivated | -1.016 | 0.331 |
| IL1 | -2.797 | -1.655 |
| Rapamycin | -4.057 | -1.301 |
| Tcell | -0.6 | -0.717 |
| GMCSF | -0.85 | -0.842 |
| IFNab | -0.973 | -0.762 |
| IFNg | -1.97 | -1.654 |
| IFNg_GMCSF1 | -2.024 | -0.496 |
| Rv1432_day32 | -0.271 | 0.832 |
| Rv1565c_day32 | -1.535 | 0.327 |
| secA2_input | 1.032 | -0.564 |
| delta_Rv3594 | 3.006 | 0.795 |
| delta_Rv3717 | 1.845 | 0.467 |
| delta_Rv3811 | -0.583 | 0.376 |
| delta_Rv0954 | -0.506 | -0.137 |
| PonA1 | 3.098 | 0.819 |
| EccD1_KO | -0.822 | 0.234 |
| EspI_KO | -3.679 | 0.0 |
| PE35_KO | -0.846 | 0.945 |
| PPE68_KO | -0.214 | 1.008 |
| glycerol2 | -0.231 | 0.122 |
| lignocerate | -1.782 | -0.441 |
| oleate | 0.588 | 0.481 |
| phosphatidylcholine | -1.006 | 0.115 |
| acetate | 0.136 | -0.712 |
| glucAc | -3.463 | 0.006 |
| Rv0950ko | -1.493 | 0.537 |
| Rv1096ko | -1.113 | 0.335 |
| Rv3684ko | -3.124 | 0.612 |
| delta_otsA_trehalose | 0.09 | 0.429 |