Top 10 genes with highest correlation to Rv0675/echA5:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0741/- | (cc=0.4919) | info on Rv0741/- |
| Rv1120c/- | (cc=0.4732) | info on Rv1120c/- |
| Rv3038c/- | (cc=0.4511) | info on Rv3038c/- |
| Rv0113/gmhA | (cc=0.4505) | info on Rv0113/gmhA |
| Rv1734c/- | (cc=0.4447) | info on Rv1734c/- |
| Rv0737/- | (cc=0.4442) | info on Rv0737/- |
| Rv3431c/- | (cc=0.4352) | info on Rv3431c/- |
| Rv3163c/- | (cc=0.4319) | info on Rv3163c/- |
| Rv2174/mptA | (cc=0.4228) | info on Rv2174/mptA |
| Rv0219/- | (cc=0.4194) | info on Rv0219/- |
Correlation of Rv0675/echA5 with Rv0113/gmhA
Normalized LFCs for Rv0675/echA5:
(description and provenance of datasets)
| Rv0675/echA5 | Rv0113/gmhA | |
| Fe_supp_jason_reseq | -0.901 | 2.595 |
| low_pH_jason_reseq | -3.001 | -0.831 |
| NO_jason_reseq | 0.541 | -1.536 |
| B6_jason_reseq | -0.342 | 3.067 |
| MHCII_jason_reseq | 2.09 | 2.446 |
| Isoniazid02 | 0.298 | 1.801 |
| Rifampicin4 | 0.263 | 0.1 |
| Ethambutol3 | 0.024 | 0.327 |
| Meropenem3 | -0.315 | -0.341 |
| Vancomycin16 | 0.207 | -0.098 |
| Rv2680_day32 | 0.439 | 0.0 |
| H37Rv_KO_MarP | 0.446 | 0.754 |
| hypoxia_3wks | 0.598 | -0.415 |
| hypoxia_6wks | -0.457 | -0.708 |
| glycerol | -2.319 | 0.398 |
| cholesterol | -2.408 | -0.353 |
| AJ | -1.867 | 0.874 |
| Bibs02 | -2.874 | 2.099 |
| Bibs02c | 1.92 | 2.536 |
| BL6 | -2.205 | -0.982 |
| BL6a | 0.567 | 1.936 |
| BXD01 | -0.443 | -0.079 |
| BXD010 | -0.7 | 0.273 |
| BXD011 | -1.322 | 0.097 |
| BXD03 | -2.126 | -1.526 |
| BXD04 | -1.493 | -0.5 |
| BXD05 | -0.692 | -2.089 |
| BXD06 | -1.612 | 0.051 |
| BXD07 | -1.174 | 0.227 |
| BXD08 | -0.452 | -0.053 |
| BXD09 | -1.881 | -0.886 |
| CAST | 0.759 | 1.552 |
| CCcont | -2.347 | -0.255 |
| DS01 | -0.24 | 2.712 |
| DS02 | 0.239 | 2.039 |
| DS04 | -2.228 | 2.791 |
| DS0c | 0.0 | 2.918 |
| GP01 | -1.393 | -1.236 |
| GP02 | 1.173 | 0.899 |
| GP0c | -1.159 | 0.416 |
| NOD | -0.763 | 1.671 |
| NZO | -1.296 | -0.207 |
| PWK | -0.374 | 0.6 |
| H37Rv_KO_CtpC | -1.056 | -0.065 |
| H37Rv_KO_CtpD | 0.204 | 1.187 |
| H37Rv_KO_Rv1272 | -2.486 | -0.415 |
| H37Rv_KO_SugABC | -1.647 | 1.38 |
| H37Rv_KO_MbtN | -0.35 | 1.197 |
| Trans05 | -2.172 | -0.689 |
| macrophage_unactivated | -1.016 | 0.12 |
| IL1 | -2.797 | -0.489 |
| Rapamycin | -4.057 | -1.396 |
| Tcell | -0.6 | -0.261 |
| GMCSF | -0.85 | 0.573 |
| IFNab | -0.973 | -0.916 |
| IFNg | -1.97 | -0.559 |
| IFNg_GMCSF1 | -2.024 | 0.682 |
| Rv1432_day32 | -0.271 | 2.356 |
| Rv1565c_day32 | -1.535 | -0.415 |
| secA2_input | 1.032 | -0.188 |
| delta_Rv3594 | 3.006 | 3.223 |
| delta_Rv3717 | 1.845 | 1.258 |
| delta_Rv3811 | -0.583 | 0.813 |
| delta_Rv0954 | -0.506 | 1.95 |
| PonA1 | 3.098 | 2.546 |
| EccD1_KO | -0.822 | -1.5 |
| EspI_KO | -3.679 | -2.524 |
| PE35_KO | -0.846 | -1.097 |
| PPE68_KO | -0.214 | -1.328 |
| glycerol2 | -0.231 | 0.311 |
| lignocerate | -1.782 | 0.868 |
| oleate | 0.588 | 0.588 |
| phosphatidylcholine | -1.006 | 0.496 |
| acetate | 0.136 | 0.836 |
| glucAc | -3.463 | 0.971 |
| Rv0950ko | -1.493 | 1.423 |
| Rv1096ko | -1.113 | -0.142 |
| Rv3684ko | -3.124 | 0.151 |
| delta_otsA_trehalose | 0.09 | 0.305 |