Top 10 genes with highest correlation to Rv0675/echA5:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0741/- | (cc=0.4919) | info on Rv0741/- |
| Rv1120c/- | (cc=0.4732) | info on Rv1120c/- |
| Rv3038c/- | (cc=0.4511) | info on Rv3038c/- |
| Rv0113/gmhA | (cc=0.4505) | info on Rv0113/gmhA |
| Rv1734c/- | (cc=0.4447) | info on Rv1734c/- |
| Rv0737/- | (cc=0.4442) | info on Rv0737/- |
| Rv3431c/- | (cc=0.4352) | info on Rv3431c/- |
| Rv3163c/- | (cc=0.4319) | info on Rv3163c/- |
| Rv2174/mptA | (cc=0.4228) | info on Rv2174/mptA |
| Rv0219/- | (cc=0.4194) | info on Rv0219/- |
Correlation of Rv0675/echA5 with Rv1120c/-
Normalized LFCs for Rv0675/echA5:
(description and provenance of datasets)
| Rv0675/echA5 | Rv1120c/- | |
| Fe_supp_jason_reseq | -0.901 | -1.432 |
| low_pH_jason_reseq | -3.001 | 1.389 |
| NO_jason_reseq | 0.541 | -0.953 |
| B6_jason_reseq | -0.342 | 0.434 |
| MHCII_jason_reseq | 2.09 | -0.668 |
| Isoniazid02 | 0.298 | -0.194 |
| Rifampicin4 | 0.263 | -0.49 |
| Ethambutol3 | 0.024 | -0.22 |
| Meropenem3 | -0.315 | 0.595 |
| Vancomycin16 | 0.207 | -0.231 |
| Rv2680_day32 | 0.439 | 0.033 |
| H37Rv_KO_MarP | 0.446 | -0.062 |
| hypoxia_3wks | 0.598 | -0.506 |
| hypoxia_6wks | -0.457 | -0.662 |
| glycerol | -2.319 | -2.187 |
| cholesterol | -2.408 | -1.203 |
| AJ | -1.867 | -1.41 |
| Bibs02 | -2.874 | -3.913 |
| Bibs02c | 1.92 | -1.791 |
| BL6 | -2.205 | -2.915 |
| BL6a | 0.567 | -0.977 |
| BXD01 | -0.443 | 0.099 |
| BXD010 | -0.7 | -1.234 |
| BXD011 | -1.322 | -1.263 |
| BXD03 | -2.126 | -2.487 |
| BXD04 | -1.493 | -1.923 |
| BXD05 | -0.692 | -1.416 |
| BXD06 | -1.612 | -0.683 |
| BXD07 | -1.174 | -1.901 |
| BXD08 | -0.452 | 0.497 |
| BXD09 | -1.881 | -1.763 |
| CAST | 0.759 | -0.16 |
| CCcont | -2.347 | -3.48 |
| DS01 | -0.24 | -2.146 |
| DS02 | 0.239 | -1.649 |
| DS04 | -2.228 | -1.982 |
| DS0c | 0.0 | -3.268 |
| GP01 | -1.393 | -2.301 |
| GP02 | 1.173 | -1.254 |
| GP0c | -1.159 | -1.631 |
| NOD | -0.763 | 0.786 |
| NZO | -1.296 | -0.879 |
| PWK | -0.374 | -2.252 |
| H37Rv_KO_CtpC | -1.056 | -1.271 |
| H37Rv_KO_CtpD | 0.204 | -2.507 |
| H37Rv_KO_Rv1272 | -2.486 | -3.287 |
| H37Rv_KO_SugABC | -1.647 | -1.7 |
| H37Rv_KO_MbtN | -0.35 | -0.735 |
| Trans05 | -2.172 | -0.091 |
| macrophage_unactivated | -1.016 | -1.509 |
| IL1 | -2.797 | -2.076 |
| Rapamycin | -4.057 | -3.676 |
| Tcell | -0.6 | -0.248 |
| GMCSF | -0.85 | -1.695 |
| IFNab | -0.973 | -2.116 |
| IFNg | -1.97 | -3.434 |
| IFNg_GMCSF1 | -2.024 | -2.017 |
| Rv1432_day32 | -0.271 | 0.0 |
| Rv1565c_day32 | -1.535 | 0.952 |
| secA2_input | 1.032 | 2.934 |
| delta_Rv3594 | 3.006 | -1.617 |
| delta_Rv3717 | 1.845 | 1.457 |
| delta_Rv3811 | -0.583 | -3.538 |
| delta_Rv0954 | -0.506 | -1.69 |
| PonA1 | 3.098 | -0.523 |
| EccD1_KO | -0.822 | -1.013 |
| EspI_KO | -3.679 | -3.357 |
| PE35_KO | -0.846 | -1.321 |
| PPE68_KO | -0.214 | -1.699 |
| glycerol2 | -0.231 | -2.081 |
| lignocerate | -1.782 | -0.856 |
| oleate | 0.588 | 0.81 |
| phosphatidylcholine | -1.006 | -0.311 |
| acetate | 0.136 | -1.007 |
| glucAc | -3.463 | -2.902 |
| Rv0950ko | -1.493 | -4.828 |
| Rv1096ko | -1.113 | -3.432 |
| Rv3684ko | -3.124 | -4.225 |
| delta_otsA_trehalose | 0.09 | 1.482 |