Top 10 genes with highest correlation to Rv0664/vapB8:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0914c/- | (cc=0.5762) | info on Rv0914c/- |
| Rv3677c/- | (cc=0.5549) | info on Rv3677c/- |
| Rv1186c/- | (cc=0.5209) | info on Rv1186c/- |
| Rv1974/- | (cc=0.501) | info on Rv1974/- |
| Rv1028c/kdpD | (cc=0.5004) | info on Rv1028c/kdpD |
| Rv1377c/- | (cc=0.4956) | info on Rv1377c/- |
| Rv0379/secE2 | (cc=0.4904) | info on Rv0379/secE2 |
| Rv2919c/glnB | (cc=0.4875) | info on Rv2919c/glnB |
| Rv1718/- | (cc=0.4836) | info on Rv1718/- |
| Rv3081/- | (cc=0.4808) | info on Rv3081/- |
Correlation of Rv0664/vapB8 with Rv1974/-
Normalized LFCs for Rv0664/vapB8:
(description and provenance of datasets)
| Rv0664/vapB8 | Rv1974/- | |
| Fe_supp_jason_reseq | 1.137 | 0.633 |
| low_pH_jason_reseq | 2.454 | 0.015 |
| NO_jason_reseq | 0.89 | -0.559 |
| B6_jason_reseq | 1.504 | 1.201 |
| MHCII_jason_reseq | 0.379 | 1.739 |
| Isoniazid02 | -0.674 | 0.106 |
| Rifampicin4 | -0.853 | -0.829 |
| Ethambutol3 | -0.79 | -0.062 |
| Meropenem3 | -0.579 | 1.264 |
| Vancomycin16 | -0.231 | 0.066 |
| Rv2680_day32 | -3.466 | 1.367 |
| H37Rv_KO_MarP | 0.569 | -0.95 |
| hypoxia_3wks | -1.639 | -0.801 |
| hypoxia_6wks | 1.374 | -0.319 |
| glycerol | -0.12 | -0.471 |
| cholesterol | 0.76 | -0.672 |
| AJ | 0.012 | -0.346 |
| Bibs02 | 1.628 | 0.268 |
| Bibs02c | -0.324 | 0.311 |
| BL6 | -0.31 | -1.414 |
| BL6a | -0.653 | -0.199 |
| BXD01 | -0.555 | -1.518 |
| BXD010 | -0.555 | -2.27 |
| BXD011 | -1.439 | -1.543 |
| BXD03 | -2.585 | -1.714 |
| BXD04 | -2.292 | -2.232 |
| BXD05 | -1.153 | -0.87 |
| BXD06 | -1.033 | -1.465 |
| BXD07 | -1.003 | -1.398 |
| BXD08 | -1.111 | -1.622 |
| BXD09 | -1.236 | -1.346 |
| CAST | 0.479 | 0.085 |
| CCcont | -1.584 | -1.236 |
| DS01 | 1.48 | 0.241 |
| DS02 | 0.373 | 0.117 |
| DS04 | 1.131 | -0.141 |
| DS0c | 1.703 | 0.006 |
| GP01 | -1.047 | 0.371 |
| GP02 | -0.43 | -0.885 |
| GP0c | -0.104 | -1.154 |
| NOD | 0.368 | -0.163 |
| NZO | -1.143 | 0.162 |
| PWK | -0.358 | -0.274 |
| H37Rv_KO_CtpC | -4.787 | -1.474 |
| H37Rv_KO_CtpD | -3.036 | -1.606 |
| H37Rv_KO_Rv1272 | -2.03 | -1.434 |
| H37Rv_KO_SugABC | -0.216 | -0.667 |
| H37Rv_KO_MbtN | -3.037 | -2.367 |
| Trans05 | -2.125 | -1.444 |
| macrophage_unactivated | -1.461 | -1.162 |
| IL1 | -1.071 | -0.688 |
| Rapamycin | 0.552 | -1.409 |
| Tcell | 0.437 | -1.466 |
| GMCSF | -0.428 | -1.288 |
| IFNab | 0.71 | -0.98 |
| IFNg | 2.638 | -0.818 |
| IFNg_GMCSF1 | 0.273 | -0.962 |
| Rv1432_day32 | -1.605 | -1.304 |
| Rv1565c_day32 | 0.0 | 0.156 |
| secA2_input | -2.423 | 0.167 |
| delta_Rv3594 | 1.643 | 0.941 |
| delta_Rv3717 | -0.065 | 0.837 |
| delta_Rv3811 | 0.11 | 1.031 |
| delta_Rv0954 | 0.244 | 1.516 |
| PonA1 | 2.248 | 0.54 |
| EccD1_KO | 1.644 | 0.408 |
| EspI_KO | 0.987 | 1.768 |
| PE35_KO | 0.866 | 1.053 |
| PPE68_KO | 0.675 | 0.464 |
| glycerol2 | 0.062 | 0.993 |
| lignocerate | 0.784 | 1.427 |
| oleate | -2.185 | -0.781 |
| phosphatidylcholine | 0.861 | 1.108 |
| acetate | 2.534 | 0.828 |
| glucAc | 1.623 | 1.372 |
| Rv0950ko | 0.971 | -0.22 |
| Rv1096ko | 2.735 | -0.383 |
| Rv3684ko | 2.338 | 1.349 |
| delta_otsA_trehalose | 1.323 | -0.124 |