Top 10 genes with highest correlation to Rv0664/vapB8:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0914c/- | (cc=0.5762) | info on Rv0914c/- |
| Rv3677c/- | (cc=0.5549) | info on Rv3677c/- |
| Rv1186c/- | (cc=0.5209) | info on Rv1186c/- |
| Rv1974/- | (cc=0.501) | info on Rv1974/- |
| Rv1028c/kdpD | (cc=0.5004) | info on Rv1028c/kdpD |
| Rv1377c/- | (cc=0.4956) | info on Rv1377c/- |
| Rv0379/secE2 | (cc=0.4904) | info on Rv0379/secE2 |
| Rv2919c/glnB | (cc=0.4875) | info on Rv2919c/glnB |
| Rv1718/- | (cc=0.4836) | info on Rv1718/- |
| Rv3081/- | (cc=0.4808) | info on Rv3081/- |
Correlation of Rv0664/vapB8 with Rv0379/secE2
Normalized LFCs for Rv0664/vapB8:
(description and provenance of datasets)
| Rv0664/vapB8 | Rv0379/secE2 | |
| Fe_supp_jason_reseq | 1.137 | -0.707 |
| low_pH_jason_reseq | 2.454 | -0.32 |
| NO_jason_reseq | 0.89 | 1.197 |
| B6_jason_reseq | 1.504 | -0.727 |
| MHCII_jason_reseq | 0.379 | -0.542 |
| Isoniazid02 | -0.674 | 0.799 |
| Rifampicin4 | -0.853 | 0.046 |
| Ethambutol3 | -0.79 | 1.3 |
| Meropenem3 | -0.579 | 0.272 |
| Vancomycin16 | -0.231 | 0.44 |
| Rv2680_day32 | -3.466 | -0.692 |
| H37Rv_KO_MarP | 0.569 | -0.339 |
| hypoxia_3wks | -1.639 | -1.703 |
| hypoxia_6wks | 1.374 | 0.597 |
| glycerol | -0.12 | 1.29 |
| cholesterol | 0.76 | 0.307 |
| AJ | 0.012 | 0.178 |
| Bibs02 | 1.628 | 0.943 |
| Bibs02c | -0.324 | 0.562 |
| BL6 | -0.31 | -0.753 |
| BL6a | -0.653 | -0.694 |
| BXD01 | -0.555 | -3.242 |
| BXD010 | -0.555 | -1.486 |
| BXD011 | -1.439 | -2.338 |
| BXD03 | -2.585 | -3.193 |
| BXD04 | -2.292 | -2.154 |
| BXD05 | -1.153 | -2.001 |
| BXD06 | -1.033 | -1.712 |
| BXD07 | -1.003 | -3.111 |
| BXD08 | -1.111 | -2.542 |
| BXD09 | -1.236 | -2.019 |
| CAST | 0.479 | -0.552 |
| CCcont | -1.584 | -1.958 |
| DS01 | 1.48 | 0.289 |
| DS02 | 0.373 | 0.159 |
| DS04 | 1.131 | 0.048 |
| DS0c | 1.703 | -0.13 |
| GP01 | -1.047 | -2.055 |
| GP02 | -0.43 | -2.334 |
| GP0c | -0.104 | -2.237 |
| NOD | 0.368 | -0.937 |
| NZO | -1.143 | -0.759 |
| PWK | -0.358 | 0.681 |
| H37Rv_KO_CtpC | -4.787 | -0.505 |
| H37Rv_KO_CtpD | -3.036 | -0.49 |
| H37Rv_KO_Rv1272 | -2.03 | 0.006 |
| H37Rv_KO_SugABC | -0.216 | -2.379 |
| H37Rv_KO_MbtN | -3.037 | -1.646 |
| Trans05 | -2.125 | -0.513 |
| macrophage_unactivated | -1.461 | 0.035 |
| IL1 | -1.071 | -0.392 |
| Rapamycin | 0.552 | -0.365 |
| Tcell | 0.437 | -1.039 |
| GMCSF | -0.428 | -2.521 |
| IFNab | 0.71 | -1.466 |
| IFNg | 2.638 | -1.048 |
| IFNg_GMCSF1 | 0.273 | 2.118 |
| Rv1432_day32 | -1.605 | 0.18 |
| Rv1565c_day32 | 0.0 | -0.085 |
| secA2_input | -2.423 | -1.49 |
| delta_Rv3594 | 1.643 | 0.078 |
| delta_Rv3717 | -0.065 | -1.111 |
| delta_Rv3811 | 0.11 | 0.843 |
| delta_Rv0954 | 0.244 | 1.454 |
| PonA1 | 2.248 | 0.87 |
| EccD1_KO | 1.644 | -0.02 |
| EspI_KO | 0.987 | 0.319 |
| PE35_KO | 0.866 | 0.055 |
| PPE68_KO | 0.675 | 0.32 |
| glycerol2 | 0.062 | 1.188 |
| lignocerate | 0.784 | 2.25 |
| oleate | -2.185 | 0.0 |
| phosphatidylcholine | 0.861 | 1.401 |
| acetate | 2.534 | 3.712 |
| glucAc | 1.623 | 3.12 |
| Rv0950ko | 0.971 | 3.347 |
| Rv1096ko | 2.735 | 2.925 |
| Rv3684ko | 2.338 | 2.689 |
| delta_otsA_trehalose | 1.323 | -1.235 |