Top 10 genes with highest correlation to Rv0647c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0473/- | (cc=0.5503) | info on Rv0473/- |
| Rv0742/PE_PGRS8 | (cc=0.5395) | info on Rv0742/PE_PGRS8 |
| Rv1128c/- | (cc=0.5296) | info on Rv1128c/- |
| Rv1787/PPE25 | (cc=0.5248) | info on Rv1787/PPE25 |
| Rv0148/- | (cc=0.5141) | info on Rv0148/- |
| Rv3020c/esxS | (cc=0.5091) | info on Rv3020c/esxS |
| Rv2584c/apt | (cc=0.501) | info on Rv2584c/apt |
| Rv3840/- | (cc=0.4988) | info on Rv3840/- |
| Rv0844c/narL | (cc=0.4885) | info on Rv0844c/narL |
| Rv1622c/cydB | (cc=0.4879) | info on Rv1622c/cydB |
Correlation of Rv0647c/- with Rv3020c/esxS
Normalized LFCs for Rv0647c/-:
(description and provenance of datasets)
| Rv0647c/- | Rv3020c/esxS | |
| Fe_supp_jason_reseq | -0.965 | -0.174 |
| low_pH_jason_reseq | -0.893 | -0.077 |
| NO_jason_reseq | 0.263 | -1.436 |
| B6_jason_reseq | -0.411 | -2.341 |
| MHCII_jason_reseq | -1.082 | -1.579 |
| Isoniazid02 | -0.678 | -0.776 |
| Rifampicin4 | 0.176 | 0.222 |
| Ethambutol3 | -0.283 | -0.471 |
| Meropenem3 | 0.68 | 0.086 |
| Vancomycin16 | 0.377 | -0.172 |
| Rv2680_day32 | 1.282 | -0.756 |
| H37Rv_KO_MarP | 0.083 | -0.494 |
| hypoxia_3wks | 0.594 | 0.997 |
| hypoxia_6wks | 0.593 | 1.43 |
| glycerol | 0.401 | -2.85 |
| cholesterol | -0.545 | -0.657 |
| AJ | -0.57 | -1.052 |
| Bibs02 | 0.789 | -2.448 |
| Bibs02c | -0.45 | -0.212 |
| BL6 | -0.232 | -1.966 |
| BL6a | 0.27 | 0.865 |
| BXD01 | 0.828 | 1.258 |
| BXD010 | -0.096 | 1.112 |
| BXD011 | 1.056 | 1.23 |
| BXD03 | 0.805 | -0.226 |
| BXD04 | 0.494 | 0.73 |
| BXD05 | 1.346 | 0.239 |
| BXD06 | 1.106 | 0.531 |
| BXD07 | 0.382 | 0.177 |
| BXD08 | 2.15 | 1.232 |
| BXD09 | 0.25 | 0.718 |
| CAST | -0.174 | 0.332 |
| CCcont | -0.977 | -1.026 |
| DS01 | 0.166 | -0.19 |
| DS02 | -0.468 | 0.457 |
| DS04 | 0.424 | 1.348 |
| DS0c | 0.431 | -0.984 |
| GP01 | 2.005 | 0.297 |
| GP02 | 1.541 | 0.286 |
| GP0c | 1.998 | -0.132 |
| NOD | -1.181 | 0.609 |
| NZO | 0.14 | 0.22 |
| PWK | 0.75 | 0.978 |
| H37Rv_KO_CtpC | -0.45 | 0.71 |
| H37Rv_KO_CtpD | 1.267 | 0.954 |
| H37Rv_KO_Rv1272 | 0.586 | 1.691 |
| H37Rv_KO_SugABC | -0.901 | -0.883 |
| H37Rv_KO_MbtN | 1.806 | 2.472 |
| Trans05 | 0.665 | 1.533 |
| macrophage_unactivated | 2.25 | 1.001 |
| IL1 | 0.955 | 0.377 |
| Rapamycin | 1.182 | -0.503 |
| Tcell | 1.254 | 0.482 |
| GMCSF | 2.131 | 1.022 |
| IFNab | 0.774 | 0.067 |
| IFNg | 0.861 | 1.296 |
| IFNg_GMCSF1 | 1.012 | 1.323 |
| Rv1432_day32 | 1.669 | 1.443 |
| Rv1565c_day32 | 0.359 | 0.0 |
| secA2_input | 0.606 | 1.094 |
| delta_Rv3594 | -1.41 | -1.104 |
| delta_Rv3717 | -0.077 | -0.617 |
| delta_Rv3811 | -0.578 | -0.491 |
| delta_Rv0954 | -1.143 | -2.474 |
| PonA1 | -1.249 | -1.08 |
| EccD1_KO | -0.099 | 0.855 |
| EspI_KO | -0.536 | -0.773 |
| PE35_KO | -0.359 | 0.665 |
| PPE68_KO | -0.394 | 0.061 |
| glycerol2 | -0.319 | -1.344 |
| lignocerate | -0.229 | -1.34 |
| oleate | 0.525 | -0.02 |
| phosphatidylcholine | -0.319 | -0.734 |
| acetate | 0.223 | -1.829 |
| glucAc | -0.569 | -1.868 |
| Rv0950ko | -0.603 | 0.983 |
| Rv1096ko | -0.793 | -1.592 |
| Rv3684ko | -1.189 | -0.976 |
| delta_otsA_trehalose | -2.372 | -1.151 |