Top 10 genes with highest correlation to Rv0647c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0473/- | (cc=0.5503) | info on Rv0473/- |
| Rv0742/PE_PGRS8 | (cc=0.5395) | info on Rv0742/PE_PGRS8 |
| Rv1128c/- | (cc=0.5296) | info on Rv1128c/- |
| Rv1787/PPE25 | (cc=0.5248) | info on Rv1787/PPE25 |
| Rv0148/- | (cc=0.5141) | info on Rv0148/- |
| Rv3020c/esxS | (cc=0.5091) | info on Rv3020c/esxS |
| Rv2584c/apt | (cc=0.501) | info on Rv2584c/apt |
| Rv3840/- | (cc=0.4988) | info on Rv3840/- |
| Rv0844c/narL | (cc=0.4885) | info on Rv0844c/narL |
| Rv1622c/cydB | (cc=0.4879) | info on Rv1622c/cydB |
Correlation of Rv0647c/- with Rv2584c/apt
Normalized LFCs for Rv0647c/-:
(description and provenance of datasets)
| Rv0647c/- | Rv2584c/apt | |
| Fe_supp_jason_reseq | -0.965 | -0.227 |
| low_pH_jason_reseq | -0.893 | 0.565 |
| NO_jason_reseq | 0.263 | 0.404 |
| B6_jason_reseq | -0.411 | -0.929 |
| MHCII_jason_reseq | -1.082 | -1.215 |
| Isoniazid02 | -0.678 | -0.808 |
| Rifampicin4 | 0.176 | -0.146 |
| Ethambutol3 | -0.283 | -0.59 |
| Meropenem3 | 0.68 | -0.443 |
| Vancomycin16 | 0.377 | -0.268 |
| Rv2680_day32 | 1.282 | 0.892 |
| H37Rv_KO_MarP | 0.083 | -0.556 |
| hypoxia_3wks | 0.594 | 0.738 |
| hypoxia_6wks | 0.593 | 1.046 |
| glycerol | 0.401 | 0.758 |
| cholesterol | -0.545 | -0.069 |
| AJ | -0.57 | 0.81 |
| Bibs02 | 0.789 | 1.106 |
| Bibs02c | -0.45 | 0.932 |
| BL6 | -0.232 | 0.958 |
| BL6a | 0.27 | 1.499 |
| BXD01 | 0.828 | 0.868 |
| BXD010 | -0.096 | 1.16 |
| BXD011 | 1.056 | 0.701 |
| BXD03 | 0.805 | 1.101 |
| BXD04 | 0.494 | 1.281 |
| BXD05 | 1.346 | 1.845 |
| BXD06 | 1.106 | 1.349 |
| BXD07 | 0.382 | 1.389 |
| BXD08 | 2.15 | 1.048 |
| BXD09 | 0.25 | 1.278 |
| CAST | -0.174 | 0.576 |
| CCcont | -0.977 | 1.444 |
| DS01 | 0.166 | 0.274 |
| DS02 | -0.468 | 0.12 |
| DS04 | 0.424 | -0.471 |
| DS0c | 0.431 | 0.511 |
| GP01 | 2.005 | 0.774 |
| GP02 | 1.541 | 0.966 |
| GP0c | 1.998 | 1.337 |
| NOD | -1.181 | -0.042 |
| NZO | 0.14 | 0.407 |
| PWK | 0.75 | 0.658 |
| H37Rv_KO_CtpC | -0.45 | 0.281 |
| H37Rv_KO_CtpD | 1.267 | 1.793 |
| H37Rv_KO_Rv1272 | 0.586 | 1.014 |
| H37Rv_KO_SugABC | -0.901 | 1.26 |
| H37Rv_KO_MbtN | 1.806 | 0.707 |
| Trans05 | 0.665 | 1.018 |
| macrophage_unactivated | 2.25 | 0.619 |
| IL1 | 0.955 | 0.697 |
| Rapamycin | 1.182 | 0.893 |
| Tcell | 1.254 | 0.228 |
| GMCSF | 2.131 | 2.017 |
| IFNab | 0.774 | 0.931 |
| IFNg | 0.861 | -0.013 |
| IFNg_GMCSF1 | 1.012 | 0.264 |
| Rv1432_day32 | 1.669 | 0.374 |
| Rv1565c_day32 | 0.359 | 0.041 |
| secA2_input | 0.606 | -1.75 |
| delta_Rv3594 | -1.41 | 0.347 |
| delta_Rv3717 | -0.077 | -0.422 |
| delta_Rv3811 | -0.578 | -0.207 |
| delta_Rv0954 | -1.143 | -0.433 |
| PonA1 | -1.249 | -0.406 |
| EccD1_KO | -0.099 | -0.977 |
| EspI_KO | -0.536 | -0.436 |
| PE35_KO | -0.359 | -0.688 |
| PPE68_KO | -0.394 | -0.611 |
| glycerol2 | -0.319 | 0.378 |
| lignocerate | -0.229 | 0.226 |
| oleate | 0.525 | 0.55 |
| phosphatidylcholine | -0.319 | 0.378 |
| acetate | 0.223 | 0.484 |
| glucAc | -0.569 | -0.133 |
| Rv0950ko | -0.603 | -0.703 |
| Rv1096ko | -0.793 | -0.401 |
| Rv3684ko | -1.189 | -1.117 |
| delta_otsA_trehalose | -2.372 | -0.167 |