Top 10 genes with highest correlation to Rv0631c/recC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0630c/recB | (cc=0.6291) | info on Rv0630c/recB |
| Rv0039c/- | (cc=0.5919) | info on Rv0039c/- |
| Rv0377/- | (cc=0.5309) | info on Rv0377/- |
| Rv0435c/- | (cc=0.5281) | info on Rv0435c/- |
| Rv0673/echA4 | (cc=0.523) | info on Rv0673/echA4 |
| Rv0203/- | (cc=0.5191) | info on Rv0203/- |
| Rv3655c/- | (cc=0.5107) | info on Rv3655c/- |
| Rv0633c/- | (cc=0.5096) | info on Rv0633c/- |
| Rv0372c/- | (cc=0.4799) | info on Rv0372c/- |
| Rv0650/- | (cc=0.4722) | info on Rv0650/- |
Correlation of Rv0631c/recC with Rv0377/-
Normalized LFCs for Rv0631c/recC:
(description and provenance of datasets)
| Rv0631c/recC | Rv0377/- | |
| Fe_supp_jason_reseq | -0.393 | -0.655 |
| low_pH_jason_reseq | -0.147 | -0.893 |
| NO_jason_reseq | -0.743 | 1.189 |
| B6_jason_reseq | -1.158 | 0.636 |
| MHCII_jason_reseq | -0.688 | 0.217 |
| Isoniazid02 | 0.153 | 0.451 |
| Rifampicin4 | 0.42 | 0.368 |
| Ethambutol3 | 0.586 | 0.396 |
| Meropenem3 | 0.506 | 0.503 |
| Vancomycin16 | 0.475 | 0.26 |
| Rv2680_day32 | -0.086 | -0.642 |
| H37Rv_KO_MarP | 0.186 | 0.746 |
| hypoxia_3wks | -0.702 | -0.694 |
| hypoxia_6wks | 0.238 | -0.821 |
| glycerol | 0.66 | -1.173 |
| cholesterol | -0.079 | 0.323 |
| AJ | 0.37 | 0.148 |
| Bibs02 | 1.066 | 1.06 |
| Bibs02c | 0.684 | 0.441 |
| BL6 | -0.381 | -1.4 |
| BL6a | -0.08 | -0.346 |
| BXD01 | -0.828 | -1.205 |
| BXD010 | -1.21 | -0.352 |
| BXD011 | -0.482 | -1.696 |
| BXD03 | -0.275 | -1.01 |
| BXD04 | -0.54 | -0.584 |
| BXD05 | -0.535 | -0.258 |
| BXD06 | -0.557 | -1.058 |
| BXD07 | -0.985 | -1.844 |
| BXD08 | -0.722 | -1.162 |
| BXD09 | -1.036 | -0.713 |
| CAST | 0.34 | -0.766 |
| CCcont | -0.51 | -2.602 |
| DS01 | 0.606 | 0.541 |
| DS02 | 0.057 | -0.098 |
| DS04 | 1.405 | 0.649 |
| DS0c | -0.148 | 0.859 |
| GP01 | -0.472 | -1.265 |
| GP02 | -1.504 | -2.155 |
| GP0c | -1.145 | -2.122 |
| NOD | 0.029 | -0.205 |
| NZO | 0.295 | -1.29 |
| PWK | 0.222 | -0.342 |
| H37Rv_KO_CtpC | -0.358 | -1.392 |
| H37Rv_KO_CtpD | -0.105 | -1.364 |
| H37Rv_KO_Rv1272 | -0.287 | -1.256 |
| H37Rv_KO_SugABC | 0.135 | 0.456 |
| H37Rv_KO_MbtN | -1.008 | -1.836 |
| Trans05 | -0.895 | -2.179 |
| macrophage_unactivated | 0.761 | -0.36 |
| IL1 | 0.3 | 0.789 |
| Rapamycin | 0.939 | -1.522 |
| Tcell | 0.0 | -0.635 |
| GMCSF | 1.027 | -0.459 |
| IFNab | 0.157 | -0.112 |
| IFNg | -0.142 | -0.358 |
| IFNg_GMCSF1 | 1.222 | 0.883 |
| Rv1432_day32 | -0.209 | 0.0 |
| Rv1565c_day32 | 0.253 | 2.132 |
| secA2_input | 0.348 | -0.861 |
| delta_Rv3594 | 0.453 | 1.456 |
| delta_Rv3717 | 0.112 | 0.452 |
| delta_Rv3811 | 0.349 | 1.533 |
| delta_Rv0954 | 0.023 | 1.591 |
| PonA1 | -0.864 | 1.08 |
| EccD1_KO | 0.053 | -0.171 |
| EspI_KO | 0.519 | 2.387 |
| PE35_KO | -0.295 | 1.552 |
| PPE68_KO | -0.266 | 0.688 |
| glycerol2 | -1.609 | -2.626 |
| lignocerate | -0.941 | -1.671 |
| oleate | -1.012 | -0.784 |
| phosphatidylcholine | -0.959 | -1.863 |
| acetate | -1.092 | -1.662 |
| glucAc | -0.768 | -2.542 |
| Rv0950ko | 0.259 | 1.517 |
| Rv1096ko | 1.785 | 0.971 |
| Rv3684ko | 1.038 | 1.055 |
| delta_otsA_trehalose | -0.107 | 1.917 |