Top 10 genes with highest correlation to Rv0631c/recC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0630c/recB | (cc=0.6291) | info on Rv0630c/recB |
| Rv0039c/- | (cc=0.5919) | info on Rv0039c/- |
| Rv0377/- | (cc=0.5309) | info on Rv0377/- |
| Rv0435c/- | (cc=0.5281) | info on Rv0435c/- |
| Rv0673/echA4 | (cc=0.523) | info on Rv0673/echA4 |
| Rv0203/- | (cc=0.5191) | info on Rv0203/- |
| Rv3655c/- | (cc=0.5107) | info on Rv3655c/- |
| Rv0633c/- | (cc=0.5096) | info on Rv0633c/- |
| Rv0372c/- | (cc=0.4799) | info on Rv0372c/- |
| Rv0650/- | (cc=0.4722) | info on Rv0650/- |
Correlation of Rv0631c/recC with Rv0203/-
Normalized LFCs for Rv0631c/recC:
(description and provenance of datasets)
| Rv0631c/recC | Rv0203/- | |
| Fe_supp_jason_reseq | -0.393 | 0.475 |
| low_pH_jason_reseq | -0.147 | 0.035 |
| NO_jason_reseq | -0.743 | 0.835 |
| B6_jason_reseq | -1.158 | 1.205 |
| MHCII_jason_reseq | -0.688 | -0.307 |
| Isoniazid02 | 0.153 | 1.561 |
| Rifampicin4 | 0.42 | 1.097 |
| Ethambutol3 | 0.586 | 0.226 |
| Meropenem3 | 0.506 | 0.689 |
| Vancomycin16 | 0.475 | -0.273 |
| Rv2680_day32 | -0.086 | 0.49 |
| H37Rv_KO_MarP | 0.186 | -0.188 |
| hypoxia_3wks | -0.702 | 0.108 |
| hypoxia_6wks | 0.238 | 1.666 |
| glycerol | 0.66 | 1.069 |
| cholesterol | -0.079 | 0.632 |
| AJ | 0.37 | 0.276 |
| Bibs02 | 1.066 | 1.258 |
| Bibs02c | 0.684 | -0.035 |
| BL6 | -0.381 | -1.154 |
| BL6a | -0.08 | -1.319 |
| BXD01 | -0.828 | -2.062 |
| BXD010 | -1.21 | -0.726 |
| BXD011 | -0.482 | -1.142 |
| BXD03 | -0.275 | -1.759 |
| BXD04 | -0.54 | -2.157 |
| BXD05 | -0.535 | -0.045 |
| BXD06 | -0.557 | -1.304 |
| BXD07 | -0.985 | -0.661 |
| BXD08 | -0.722 | -1.542 |
| BXD09 | -1.036 | -0.921 |
| CAST | 0.34 | 0.262 |
| CCcont | -0.51 | -2.222 |
| DS01 | 0.606 | 0.063 |
| DS02 | 0.057 | 0.481 |
| DS04 | 1.405 | 1.654 |
| DS0c | -0.148 | 0.31 |
| GP01 | -0.472 | -0.647 |
| GP02 | -1.504 | -0.369 |
| GP0c | -1.145 | -1.384 |
| NOD | 0.029 | -0.417 |
| NZO | 0.295 | 0.948 |
| PWK | 0.222 | -1.188 |
| H37Rv_KO_CtpC | -0.358 | -0.706 |
| H37Rv_KO_CtpD | -0.105 | 0.896 |
| H37Rv_KO_Rv1272 | -0.287 | -0.501 |
| H37Rv_KO_SugABC | 0.135 | -1.787 |
| H37Rv_KO_MbtN | -1.008 | -2.03 |
| Trans05 | -0.895 | -1.189 |
| macrophage_unactivated | 0.761 | -1.016 |
| IL1 | 0.3 | -0.208 |
| Rapamycin | 0.939 | 0.442 |
| Tcell | 0.0 | -0.469 |
| GMCSF | 1.027 | 0.478 |
| IFNab | 0.157 | -0.169 |
| IFNg | -0.142 | -0.305 |
| IFNg_GMCSF1 | 1.222 | -0.314 |
| Rv1432_day32 | -0.209 | 1.073 |
| Rv1565c_day32 | 0.253 | -1.899 |
| secA2_input | 0.348 | 0.809 |
| delta_Rv3594 | 0.453 | 1.776 |
| delta_Rv3717 | 0.112 | 1.547 |
| delta_Rv3811 | 0.349 | 2.425 |
| delta_Rv0954 | 0.023 | 1.371 |
| PonA1 | -0.864 | 1.686 |
| EccD1_KO | 0.053 | 0.809 |
| EspI_KO | 0.519 | 0.482 |
| PE35_KO | -0.295 | 0.963 |
| PPE68_KO | -0.266 | 0.39 |
| glycerol2 | -1.609 | -2.364 |
| lignocerate | -0.941 | -2.288 |
| oleate | -1.012 | -1.52 |
| phosphatidylcholine | -0.959 | -1.765 |
| acetate | -1.092 | -0.377 |
| glucAc | -0.768 | -1.84 |
| Rv0950ko | 0.259 | 1.143 |
| Rv1096ko | 1.785 | 1.333 |
| Rv3684ko | 1.038 | 2.292 |
| delta_otsA_trehalose | -0.107 | -2.108 |