Top 10 genes with highest correlation to Rv0631c/recC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0630c/recB | (cc=0.6291) | info on Rv0630c/recB |
| Rv0039c/- | (cc=0.5919) | info on Rv0039c/- |
| Rv0377/- | (cc=0.5309) | info on Rv0377/- |
| Rv0435c/- | (cc=0.5281) | info on Rv0435c/- |
| Rv0673/echA4 | (cc=0.523) | info on Rv0673/echA4 |
| Rv0203/- | (cc=0.5191) | info on Rv0203/- |
| Rv3655c/- | (cc=0.5107) | info on Rv3655c/- |
| Rv0633c/- | (cc=0.5096) | info on Rv0633c/- |
| Rv0372c/- | (cc=0.4799) | info on Rv0372c/- |
| Rv0650/- | (cc=0.4722) | info on Rv0650/- |
Correlation of Rv0631c/recC with Rv0630c/recB
Normalized LFCs for Rv0631c/recC:
(description and provenance of datasets)
| Rv0631c/recC | Rv0630c/recB | |
| Fe_supp_jason_reseq | -0.393 | -0.497 |
| low_pH_jason_reseq | -0.147 | -0.893 |
| NO_jason_reseq | -0.743 | 0.0 |
| B6_jason_reseq | -1.158 | -0.433 |
| MHCII_jason_reseq | -0.688 | 0.085 |
| Isoniazid02 | 0.153 | 0.691 |
| Rifampicin4 | 0.42 | 0.095 |
| Ethambutol3 | 0.586 | 0.331 |
| Meropenem3 | 0.506 | 0.218 |
| Vancomycin16 | 0.475 | 0.093 |
| Rv2680_day32 | -0.086 | 0.407 |
| H37Rv_KO_MarP | 0.186 | 0.052 |
| hypoxia_3wks | -0.702 | -0.518 |
| hypoxia_6wks | 0.238 | -0.662 |
| glycerol | 0.66 | 0.625 |
| cholesterol | -0.079 | 0.631 |
| AJ | 0.37 | 0.634 |
| Bibs02 | 1.066 | 0.738 |
| Bibs02c | 0.684 | 0.411 |
| BL6 | -0.381 | -0.862 |
| BL6a | -0.08 | -0.024 |
| BXD01 | -0.828 | -0.897 |
| BXD010 | -1.21 | -0.882 |
| BXD011 | -0.482 | -0.792 |
| BXD03 | -0.275 | -0.7 |
| BXD04 | -0.54 | -0.318 |
| BXD05 | -0.535 | -0.57 |
| BXD06 | -0.557 | -0.773 |
| BXD07 | -0.985 | -0.773 |
| BXD08 | -0.722 | -0.493 |
| BXD09 | -1.036 | -0.596 |
| CAST | 0.34 | 0.0 |
| CCcont | -0.51 | -0.928 |
| DS01 | 0.606 | 0.814 |
| DS02 | 0.057 | 0.912 |
| DS04 | 1.405 | 0.95 |
| DS0c | -0.148 | -0.162 |
| GP01 | -0.472 | 1.094 |
| GP02 | -1.504 | -0.698 |
| GP0c | -1.145 | -0.927 |
| NOD | 0.029 | -0.317 |
| NZO | 0.295 | 0.545 |
| PWK | 0.222 | 0.159 |
| H37Rv_KO_CtpC | -0.358 | -0.631 |
| H37Rv_KO_CtpD | -0.105 | -0.288 |
| H37Rv_KO_Rv1272 | -0.287 | -1.221 |
| H37Rv_KO_SugABC | 0.135 | 0.669 |
| H37Rv_KO_MbtN | -1.008 | 1.308 |
| Trans05 | -0.895 | -0.627 |
| macrophage_unactivated | 0.761 | 0.101 |
| IL1 | 0.3 | 0.54 |
| Rapamycin | 0.939 | 0.288 |
| Tcell | 0.0 | -0.743 |
| GMCSF | 1.027 | 0.557 |
| IFNab | 0.157 | 0.19 |
| IFNg | -0.142 | -0.412 |
| IFNg_GMCSF1 | 1.222 | 1.163 |
| Rv1432_day32 | -0.209 | 0.297 |
| Rv1565c_day32 | 0.253 | 0.31 |
| secA2_input | 0.348 | -0.261 |
| delta_Rv3594 | 0.453 | -0.254 |
| delta_Rv3717 | 0.112 | -0.232 |
| delta_Rv3811 | 0.349 | -0.526 |
| delta_Rv0954 | 0.023 | -0.994 |
| PonA1 | -0.864 | -0.684 |
| EccD1_KO | 0.053 | -0.345 |
| EspI_KO | 0.519 | -0.362 |
| PE35_KO | -0.295 | 0.341 |
| PPE68_KO | -0.266 | 0.374 |
| glycerol2 | -1.609 | -0.594 |
| lignocerate | -0.941 | -0.943 |
| oleate | -1.012 | -0.119 |
| phosphatidylcholine | -0.959 | -0.471 |
| acetate | -1.092 | -0.83 |
| glucAc | -0.768 | -0.899 |
| Rv0950ko | 0.259 | 0.205 |
| Rv1096ko | 1.785 | 1.671 |
| Rv3684ko | 1.038 | 0.835 |
| delta_otsA_trehalose | -0.107 | -0.689 |