Top 10 genes with highest correlation to Rv0602c/tcrA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2802c/- | (cc=0.5909) | info on Rv2802c/- |
| Rv0264c/- | (cc=0.5723) | info on Rv0264c/- |
| Rv0278c/PE_PGRS3 | (cc=0.5715) | info on Rv0278c/PE_PGRS3 |
| Rv2405/- | (cc=0.5498) | info on Rv2405/- |
| Rv3177/- | (cc=0.5495) | info on Rv3177/- |
| Rv1103c/mazE3 | (cc=0.5326) | info on Rv1103c/mazE3 |
| Rv1725c/- | (cc=0.5309) | info on Rv1725c/- |
| Rv3395c/- | (cc=0.5268) | info on Rv3395c/- |
| Rv0945/- | (cc=0.5173) | info on Rv0945/- |
| Rv2550c/vapB20 | (cc=0.516) | info on Rv2550c/vapB20 |
Correlation of Rv0602c/tcrA with Rv3395c/-
Normalized LFCs for Rv0602c/tcrA:
(description and provenance of datasets)
| Rv0602c/tcrA | Rv3395c/- | |
| Fe_supp_jason_reseq | -1.909 | 0.38 |
| low_pH_jason_reseq | -0.07 | 0.142 |
| NO_jason_reseq | -0.58 | 1.496 |
| B6_jason_reseq | -0.81 | 2.279 |
| MHCII_jason_reseq | 0.296 | 2.468 |
| Isoniazid02 | 2.155 | 2.949 |
| Rifampicin4 | 0.818 | 1.776 |
| Ethambutol3 | 1.688 | 2.824 |
| Meropenem3 | 0.879 | 0.666 |
| Vancomycin16 | 0.422 | 0.83 |
| Rv2680_day32 | 0.835 | -0.131 |
| H37Rv_KO_MarP | 0.562 | 0.207 |
| hypoxia_3wks | -0.231 | -1.463 |
| hypoxia_6wks | -0.163 | -1.685 |
| glycerol | 0.124 | 1.328 |
| cholesterol | -0.809 | -0.104 |
| AJ | 0.506 | 0.723 |
| Bibs02 | -0.556 | -1.807 |
| Bibs02c | 0.044 | -0.13 |
| BL6 | -0.472 | -1.264 |
| BL6a | 0.804 | -0.217 |
| BXD01 | 0.041 | -1.377 |
| BXD010 | 0.224 | -1.699 |
| BXD011 | -0.758 | -1.44 |
| BXD03 | 0.174 | -2.616 |
| BXD04 | -0.26 | -1.368 |
| BXD05 | -0.181 | -1.745 |
| BXD06 | -0.425 | -2.2 |
| BXD07 | -0.587 | -3.021 |
| BXD08 | 0.244 | 1.085 |
| BXD09 | -0.173 | -2.15 |
| CAST | -0.15 | 0.02 |
| CCcont | 0.413 | -0.876 |
| DS01 | -0.128 | -0.303 |
| DS02 | 0.176 | 0.214 |
| DS04 | 0.717 | 0.0 |
| DS0c | 0.583 | 0.231 |
| GP01 | 0.984 | -1.669 |
| GP02 | 1.533 | -1.61 |
| GP0c | -0.014 | -0.931 |
| NOD | -1.137 | -0.971 |
| NZO | -1.043 | -0.218 |
| PWK | -0.652 | 0.871 |
| H37Rv_KO_CtpC | 0.067 | -3.435 |
| H37Rv_KO_CtpD | -0.662 | -2.598 |
| H37Rv_KO_Rv1272 | -1.13 | 1.022 |
| H37Rv_KO_SugABC | 0.758 | -1.973 |
| H37Rv_KO_MbtN | 0.433 | -1.836 |
| Trans05 | 0.054 | -0.045 |
| macrophage_unactivated | 0.114 | -3.857 |
| IL1 | 0.107 | -4.405 |
| Rapamycin | -0.921 | -3.069 |
| Tcell | -0.241 | -2.255 |
| GMCSF | -0.195 | -2.64 |
| IFNab | -0.774 | -0.553 |
| IFNg | -1.446 | -1.849 |
| IFNg_GMCSF1 | -0.54 | -1.524 |
| Rv1432_day32 | -1.136 | -0.142 |
| Rv1565c_day32 | -0.498 | -2.088 |
| secA2_input | 0.842 | 1.108 |
| delta_Rv3594 | 0.947 | 2.877 |
| delta_Rv3717 | -0.133 | 3.361 |
| delta_Rv3811 | 0.358 | 1.988 |
| delta_Rv0954 | 1.072 | 2.113 |
| PonA1 | 0.388 | 2.765 |
| EccD1_KO | -0.036 | -0.296 |
| EspI_KO | -0.724 | -1.335 |
| PE35_KO | -0.589 | -1.508 |
| PPE68_KO | -1.03 | -1.129 |
| glycerol2 | 1.655 | 3.254 |
| lignocerate | 2.549 | 3.841 |
| oleate | -1.121 | 0.0 |
| phosphatidylcholine | 1.769 | 3.408 |
| acetate | 2.1 | 5.243 |
| glucAc | 2.569 | 3.947 |
| Rv0950ko | -1.122 | -0.344 |
| Rv1096ko | 0.555 | 0.268 |
| Rv3684ko | -0.547 | 0.4 |
| delta_otsA_trehalose | 0.014 | -0.408 |