Top 10 genes with highest correlation to Rv0602c/tcrA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2802c/- | (cc=0.5909) | info on Rv2802c/- |
| Rv0264c/- | (cc=0.5723) | info on Rv0264c/- |
| Rv0278c/PE_PGRS3 | (cc=0.5715) | info on Rv0278c/PE_PGRS3 |
| Rv2405/- | (cc=0.5498) | info on Rv2405/- |
| Rv3177/- | (cc=0.5495) | info on Rv3177/- |
| Rv1103c/mazE3 | (cc=0.5326) | info on Rv1103c/mazE3 |
| Rv1725c/- | (cc=0.5309) | info on Rv1725c/- |
| Rv3395c/- | (cc=0.5268) | info on Rv3395c/- |
| Rv0945/- | (cc=0.5173) | info on Rv0945/- |
| Rv2550c/vapB20 | (cc=0.516) | info on Rv2550c/vapB20 |
Correlation of Rv0602c/tcrA with Rv2405/-
Normalized LFCs for Rv0602c/tcrA:
(description and provenance of datasets)
| Rv0602c/tcrA | Rv2405/- | |
| Fe_supp_jason_reseq | -1.909 | -0.863 |
| low_pH_jason_reseq | -0.07 | -0.249 |
| NO_jason_reseq | -0.58 | 1.289 |
| B6_jason_reseq | -0.81 | 0.026 |
| MHCII_jason_reseq | 0.296 | -0.023 |
| Isoniazid02 | 2.155 | 0.551 |
| Rifampicin4 | 0.818 | 1.259 |
| Ethambutol3 | 1.688 | 1.004 |
| Meropenem3 | 0.879 | 1.991 |
| Vancomycin16 | 0.422 | 0.915 |
| Rv2680_day32 | 0.835 | 0.978 |
| H37Rv_KO_MarP | 0.562 | 0.549 |
| hypoxia_3wks | -0.231 | -0.403 |
| hypoxia_6wks | -0.163 | -0.633 |
| glycerol | 0.124 | -0.013 |
| cholesterol | -0.809 | 0.824 |
| AJ | 0.506 | 0.556 |
| Bibs02 | -0.556 | -2.088 |
| Bibs02c | 0.044 | -0.146 |
| BL6 | -0.472 | 0.346 |
| BL6a | 0.804 | -0.636 |
| BXD01 | 0.041 | -0.97 |
| BXD010 | 0.224 | -1.103 |
| BXD011 | -0.758 | -0.769 |
| BXD03 | 0.174 | -1.365 |
| BXD04 | -0.26 | 0.613 |
| BXD05 | -0.181 | -0.845 |
| BXD06 | -0.425 | -0.805 |
| BXD07 | -0.587 | -1.193 |
| BXD08 | 0.244 | -0.972 |
| BXD09 | -0.173 | -1.346 |
| CAST | -0.15 | 0.439 |
| CCcont | 0.413 | -0.361 |
| DS01 | -0.128 | 0.383 |
| DS02 | 0.176 | 0.236 |
| DS04 | 0.717 | -0.163 |
| DS0c | 0.583 | 0.864 |
| GP01 | 0.984 | 0.541 |
| GP02 | 1.533 | 0.673 |
| GP0c | -0.014 | 1.023 |
| NOD | -1.137 | -0.109 |
| NZO | -1.043 | -0.604 |
| PWK | -0.652 | 0.897 |
| H37Rv_KO_CtpC | 0.067 | -0.923 |
| H37Rv_KO_CtpD | -0.662 | -0.052 |
| H37Rv_KO_Rv1272 | -1.13 | 0.092 |
| H37Rv_KO_SugABC | 0.758 | 0.166 |
| H37Rv_KO_MbtN | 0.433 | -0.66 |
| Trans05 | 0.054 | 0.077 |
| macrophage_unactivated | 0.114 | -0.543 |
| IL1 | 0.107 | -0.445 |
| Rapamycin | -0.921 | -0.46 |
| Tcell | -0.241 | -0.202 |
| GMCSF | -0.195 | -2.482 |
| IFNab | -0.774 | -0.593 |
| IFNg | -1.446 | -1.932 |
| IFNg_GMCSF1 | -0.54 | 0.308 |
| Rv1432_day32 | -1.136 | 1.116 |
| Rv1565c_day32 | -0.498 | 1.369 |
| secA2_input | 0.842 | 0.607 |
| delta_Rv3594 | 0.947 | 0.584 |
| delta_Rv3717 | -0.133 | -0.746 |
| delta_Rv3811 | 0.358 | 0.415 |
| delta_Rv0954 | 1.072 | 0.986 |
| PonA1 | 0.388 | 1.944 |
| EccD1_KO | -0.036 | -0.793 |
| EspI_KO | -0.724 | 0.533 |
| PE35_KO | -0.589 | -0.099 |
| PPE68_KO | -1.03 | -0.182 |
| glycerol2 | 1.655 | 2.888 |
| lignocerate | 2.549 | 3.535 |
| oleate | -1.121 | 0.251 |
| phosphatidylcholine | 1.769 | 2.711 |
| acetate | 2.1 | 2.898 |
| glucAc | 2.569 | 2.694 |
| Rv0950ko | -1.122 | 1.049 |
| Rv1096ko | 0.555 | 1.662 |
| Rv3684ko | -0.547 | 1.064 |
| delta_otsA_trehalose | 0.014 | -1.856 |