Top 10 genes with highest correlation to Rv0580c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3652/PE_PGRS60 | (cc=0.5132) | info on Rv3652/PE_PGRS60 |
| Rv3062/ligB | (cc=0.501) | info on Rv3062/ligB |
| Rv2651c/- | (cc=0.4842) | info on Rv2651c/- |
| Rv3242c/- | (cc=0.4741) | info on Rv3242c/- |
| Rv0869c/moaA2 | (cc=0.4712) | info on Rv0869c/moaA2 |
| Rv0347/- | (cc=0.4631) | info on Rv0347/- |
| Rv0234c/gabD1 | (cc=0.4524) | info on Rv0234c/gabD1 |
| Rv0275c/- | (cc=0.4504) | info on Rv0275c/- |
| Rv2924c/fpg | (cc=0.4386) | info on Rv2924c/fpg |
| Rv0435c/- | (cc=0.4378) | info on Rv0435c/- |
Correlation of Rv0580c/- with Rv3062/ligB
Normalized LFCs for Rv0580c/-:
(description and provenance of datasets)
| Rv0580c/- | Rv3062/ligB | |
| Fe_supp_jason_reseq | -1.179 | -0.802 |
| low_pH_jason_reseq | 0.276 | 0.564 |
| NO_jason_reseq | 0.331 | 0.095 |
| B6_jason_reseq | 0.837 | 0.82 |
| MHCII_jason_reseq | -0.232 | 0.271 |
| Isoniazid02 | 0.07 | 0.335 |
| Rifampicin4 | -0.374 | 0.742 |
| Ethambutol3 | -0.168 | 1.569 |
| Meropenem3 | -0.144 | 0.392 |
| Vancomycin16 | 0.127 | 0.783 |
| Rv2680_day32 | 1.147 | 0.986 |
| H37Rv_KO_MarP | 0.394 | 0.899 |
| hypoxia_3wks | 0.459 | 0.415 |
| hypoxia_6wks | 0.317 | 0.455 |
| glycerol | 0.503 | 0.246 |
| cholesterol | 0.039 | -0.068 |
| AJ | 0.237 | -0.624 |
| Bibs02 | -0.775 | 0.046 |
| Bibs02c | -1.488 | -0.203 |
| BL6 | -0.505 | -1.337 |
| BL6a | -0.88 | -1.158 |
| BXD01 | -0.978 | -0.209 |
| BXD010 | -0.707 | -1.165 |
| BXD011 | -0.94 | -1.362 |
| BXD03 | -1.726 | -1.281 |
| BXD04 | -0.452 | 0.025 |
| BXD05 | -1.344 | -1.01 |
| BXD06 | -0.579 | -0.855 |
| BXD07 | -1.139 | -0.372 |
| BXD08 | -0.946 | -1.277 |
| BXD09 | -0.776 | -1.115 |
| CAST | 0.12 | -0.499 |
| CCcont | -1.366 | -1.287 |
| DS01 | -0.527 | -0.087 |
| DS02 | -1.079 | 0.473 |
| DS04 | -1.806 | -0.561 |
| DS0c | 0.085 | 0.57 |
| GP01 | -0.903 | -1.757 |
| GP02 | -0.649 | -0.99 |
| GP0c | -0.45 | -1.506 |
| NOD | 0.488 | -0.348 |
| NZO | 0.026 | -0.309 |
| PWK | 0.236 | -0.328 |
| H37Rv_KO_CtpC | -0.233 | -0.965 |
| H37Rv_KO_CtpD | -1.333 | -1.829 |
| H37Rv_KO_Rv1272 | -1.648 | -1.898 |
| H37Rv_KO_SugABC | -1.778 | -0.266 |
| H37Rv_KO_MbtN | -0.23 | -1.194 |
| Trans05 | -1.928 | -0.478 |
| macrophage_unactivated | 0.208 | -0.436 |
| IL1 | 0.308 | -0.148 |
| Rapamycin | -0.918 | -0.479 |
| Tcell | -1.137 | 0.261 |
| GMCSF | 0.591 | -1.154 |
| IFNab | 0.2 | -1.388 |
| IFNg | -0.46 | -1.35 |
| IFNg_GMCSF1 | -0.635 | 0.201 |
| Rv1432_day32 | 0.507 | 1.035 |
| Rv1565c_day32 | 1.216 | 0.589 |
| secA2_input | 1.193 | -0.279 |
| delta_Rv3594 | -1.081 | 0.078 |
| delta_Rv3717 | -1.258 | -0.17 |
| delta_Rv3811 | -1.408 | -1.071 |
| delta_Rv0954 | -0.536 | -0.034 |
| PonA1 | -0.995 | -0.205 |
| EccD1_KO | -0.977 | 1.072 |
| EspI_KO | -0.516 | -0.268 |
| PE35_KO | -0.668 | -0.108 |
| PPE68_KO | -0.528 | 0.173 |
| glycerol2 | -0.083 | 0.231 |
| lignocerate | -0.766 | 0.309 |
| oleate | -0.112 | 0.432 |
| phosphatidylcholine | -0.168 | 0.473 |
| acetate | -0.901 | -0.253 |
| glucAc | -1.579 | -0.193 |
| Rv0950ko | 0.663 | 1.288 |
| Rv1096ko | 0.866 | 1.927 |
| Rv3684ko | 0.72 | 1.569 |
| delta_otsA_trehalose | 0.128 | -0.11 |