Top 10 genes with highest correlation to Rv0580c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3652/PE_PGRS60 | (cc=0.5132) | info on Rv3652/PE_PGRS60 |
| Rv3062/ligB | (cc=0.501) | info on Rv3062/ligB |
| Rv2651c/- | (cc=0.4842) | info on Rv2651c/- |
| Rv3242c/- | (cc=0.4741) | info on Rv3242c/- |
| Rv0869c/moaA2 | (cc=0.4712) | info on Rv0869c/moaA2 |
| Rv0347/- | (cc=0.4631) | info on Rv0347/- |
| Rv0234c/gabD1 | (cc=0.4524) | info on Rv0234c/gabD1 |
| Rv0275c/- | (cc=0.4504) | info on Rv0275c/- |
| Rv2924c/fpg | (cc=0.4386) | info on Rv2924c/fpg |
| Rv0435c/- | (cc=0.4378) | info on Rv0435c/- |
Correlation of Rv0580c/- with Rv2924c/fpg
Normalized LFCs for Rv0580c/-:
(description and provenance of datasets)
| Rv0580c/- | Rv2924c/fpg | |
| Fe_supp_jason_reseq | -1.179 | -0.459 |
| low_pH_jason_reseq | 0.276 | -0.129 |
| NO_jason_reseq | 0.331 | 0.0 |
| B6_jason_reseq | 0.837 | 0.475 |
| MHCII_jason_reseq | -0.232 | -0.432 |
| Isoniazid02 | 0.07 | 0.196 |
| Rifampicin4 | -0.374 | -0.246 |
| Ethambutol3 | -0.168 | -0.27 |
| Meropenem3 | -0.144 | 1.267 |
| Vancomycin16 | 0.127 | 0.443 |
| Rv2680_day32 | 1.147 | 0.233 |
| H37Rv_KO_MarP | 0.394 | 0.992 |
| hypoxia_3wks | 0.459 | -0.231 |
| hypoxia_6wks | 0.317 | 0.422 |
| glycerol | 0.503 | 0.118 |
| cholesterol | 0.039 | 0.116 |
| AJ | 0.237 | 0.291 |
| Bibs02 | -0.775 | 0.287 |
| Bibs02c | -1.488 | -0.118 |
| BL6 | -0.505 | -0.247 |
| BL6a | -0.88 | -0.33 |
| BXD01 | -0.978 | -0.808 |
| BXD010 | -0.707 | -0.673 |
| BXD011 | -0.94 | -0.584 |
| BXD03 | -1.726 | -1.218 |
| BXD04 | -0.452 | -0.104 |
| BXD05 | -1.344 | -0.204 |
| BXD06 | -0.579 | -0.747 |
| BXD07 | -1.139 | -0.548 |
| BXD08 | -0.946 | -0.521 |
| BXD09 | -0.776 | -0.6 |
| CAST | 0.12 | 0.272 |
| CCcont | -1.366 | -1.013 |
| DS01 | -0.527 | -0.113 |
| DS02 | -1.079 | -0.715 |
| DS04 | -1.806 | 0.07 |
| DS0c | 0.085 | -0.512 |
| GP01 | -0.903 | -0.283 |
| GP02 | -0.649 | 1.332 |
| GP0c | -0.45 | 0.007 |
| NOD | 0.488 | -0.029 |
| NZO | 0.026 | 0.367 |
| PWK | 0.236 | 0.232 |
| H37Rv_KO_CtpC | -0.233 | -0.092 |
| H37Rv_KO_CtpD | -1.333 | -0.017 |
| H37Rv_KO_Rv1272 | -1.648 | -1.579 |
| H37Rv_KO_SugABC | -1.778 | -0.578 |
| H37Rv_KO_MbtN | -0.23 | -0.208 |
| Trans05 | -1.928 | -0.86 |
| macrophage_unactivated | 0.208 | -0.852 |
| IL1 | 0.308 | -0.291 |
| Rapamycin | -0.918 | -0.316 |
| Tcell | -1.137 | -0.472 |
| GMCSF | 0.591 | -0.372 |
| IFNab | 0.2 | -0.961 |
| IFNg | -0.46 | -0.299 |
| IFNg_GMCSF1 | -0.635 | -0.562 |
| Rv1432_day32 | 0.507 | -0.627 |
| Rv1565c_day32 | 1.216 | 0.142 |
| secA2_input | 1.193 | 0.49 |
| delta_Rv3594 | -1.081 | 0.182 |
| delta_Rv3717 | -1.258 | -0.287 |
| delta_Rv3811 | -1.408 | -0.158 |
| delta_Rv0954 | -0.536 | 0.769 |
| PonA1 | -0.995 | -0.663 |
| EccD1_KO | -0.977 | -0.082 |
| EspI_KO | -0.516 | -0.374 |
| PE35_KO | -0.668 | -0.423 |
| PPE68_KO | -0.528 | -0.397 |
| glycerol2 | -0.083 | -0.045 |
| lignocerate | -0.766 | 0.074 |
| oleate | -0.112 | 0.027 |
| phosphatidylcholine | -0.168 | 0.136 |
| acetate | -0.901 | -0.667 |
| glucAc | -1.579 | -0.431 |
| Rv0950ko | 0.663 | 0.501 |
| Rv1096ko | 0.866 | -0.296 |
| Rv3684ko | 0.72 | -0.167 |
| delta_otsA_trehalose | 0.128 | 1.731 |