Top 10 genes with highest correlation to Rv0580c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3652/PE_PGRS60 | (cc=0.5132) | info on Rv3652/PE_PGRS60 |
| Rv3062/ligB | (cc=0.501) | info on Rv3062/ligB |
| Rv2651c/- | (cc=0.4842) | info on Rv2651c/- |
| Rv3242c/- | (cc=0.4741) | info on Rv3242c/- |
| Rv0869c/moaA2 | (cc=0.4712) | info on Rv0869c/moaA2 |
| Rv0347/- | (cc=0.4631) | info on Rv0347/- |
| Rv0234c/gabD1 | (cc=0.4524) | info on Rv0234c/gabD1 |
| Rv0275c/- | (cc=0.4504) | info on Rv0275c/- |
| Rv2924c/fpg | (cc=0.4386) | info on Rv2924c/fpg |
| Rv0435c/- | (cc=0.4378) | info on Rv0435c/- |
Correlation of Rv0580c/- with Rv2651c/-
Normalized LFCs for Rv0580c/-:
(description and provenance of datasets)
| Rv0580c/- | Rv2651c/- | |
| Fe_supp_jason_reseq | -1.179 | 1.086 |
| low_pH_jason_reseq | 0.276 | -1.419 |
| NO_jason_reseq | 0.331 | 1.394 |
| B6_jason_reseq | 0.837 | 2.983 |
| MHCII_jason_reseq | -0.232 | 2.155 |
| Isoniazid02 | 0.07 | 0.0 |
| Rifampicin4 | -0.374 | 0.0 |
| Ethambutol3 | -0.168 | 0.0 |
| Meropenem3 | -0.144 | 0.0 |
| Vancomycin16 | 0.127 | 0.0 |
| Rv2680_day32 | 1.147 | 0.0 |
| H37Rv_KO_MarP | 0.394 | 0.481 |
| hypoxia_3wks | 0.459 | 0.0 |
| hypoxia_6wks | 0.317 | 0.464 |
| glycerol | 0.503 | 0.862 |
| cholesterol | 0.039 | 0.55 |
| AJ | 0.237 | 1.193 |
| Bibs02 | -0.775 | 1.219 |
| Bibs02c | -1.488 | -1.325 |
| BL6 | -0.505 | -0.792 |
| BL6a | -0.88 | -1.914 |
| BXD01 | -0.978 | -2.32 |
| BXD010 | -0.707 | -1.823 |
| BXD011 | -0.94 | -2.099 |
| BXD03 | -1.726 | -2.286 |
| BXD04 | -0.452 | 0.32 |
| BXD05 | -1.344 | -3.372 |
| BXD06 | -0.579 | -1.178 |
| BXD07 | -1.139 | -1.714 |
| BXD08 | -0.946 | -1.573 |
| BXD09 | -0.776 | -2.15 |
| CAST | 0.12 | 0.874 |
| CCcont | -1.366 | -1.767 |
| DS01 | -0.527 | -0.902 |
| DS02 | -1.079 | -0.457 |
| DS04 | -1.806 | -0.512 |
| DS0c | 0.085 | 0.771 |
| GP01 | -0.903 | -2.573 |
| GP02 | -0.649 | -1.759 |
| GP0c | -0.45 | -3.388 |
| NOD | 0.488 | -1.352 |
| NZO | 0.026 | -0.549 |
| PWK | 0.236 | 0.034 |
| H37Rv_KO_CtpC | -0.233 | 0.014 |
| H37Rv_KO_CtpD | -1.333 | -3.301 |
| H37Rv_KO_Rv1272 | -1.648 | -3.675 |
| H37Rv_KO_SugABC | -1.778 | -2.233 |
| H37Rv_KO_MbtN | -0.23 | -2.249 |
| Trans05 | -1.928 | -3.405 |
| macrophage_unactivated | 0.208 | -0.754 |
| IL1 | 0.308 | 0.792 |
| Rapamycin | -0.918 | -1.007 |
| Tcell | -1.137 | 0.156 |
| GMCSF | 0.591 | 0.063 |
| IFNab | 0.2 | -0.151 |
| IFNg | -0.46 | 0.975 |
| IFNg_GMCSF1 | -0.635 | -0.572 |
| Rv1432_day32 | 0.507 | 0.0 |
| Rv1565c_day32 | 1.216 | 0.0 |
| secA2_input | 1.193 | 1.943 |
| delta_Rv3594 | -1.081 | 0.444 |
| delta_Rv3717 | -1.258 | 0.987 |
| delta_Rv3811 | -1.408 | -0.391 |
| delta_Rv0954 | -0.536 | 0.0 |
| PonA1 | -0.995 | -0.979 |
| EccD1_KO | -0.977 | -2.263 |
| EspI_KO | -0.516 | -2.447 |
| PE35_KO | -0.668 | -2.249 |
| PPE68_KO | -0.528 | -0.873 |
| glycerol2 | -0.083 | 0.0 |
| lignocerate | -0.766 | 0.712 |
| oleate | -0.112 | 0.0 |
| phosphatidylcholine | -0.168 | 0.193 |
| acetate | -0.901 | 1.779 |
| glucAc | -1.579 | 0.877 |
| Rv0950ko | 0.663 | -0.395 |
| Rv1096ko | 0.866 | -1.315 |
| Rv3684ko | 0.72 | -0.21 |
| delta_otsA_trehalose | 0.128 | -0.266 |