Top 10 genes with highest correlation to Rv0580c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3652/PE_PGRS60 | (cc=0.5132) | info on Rv3652/PE_PGRS60 |
| Rv3062/ligB | (cc=0.501) | info on Rv3062/ligB |
| Rv2651c/- | (cc=0.4842) | info on Rv2651c/- |
| Rv3242c/- | (cc=0.4741) | info on Rv3242c/- |
| Rv0869c/moaA2 | (cc=0.4712) | info on Rv0869c/moaA2 |
| Rv0347/- | (cc=0.4631) | info on Rv0347/- |
| Rv0234c/gabD1 | (cc=0.4524) | info on Rv0234c/gabD1 |
| Rv0275c/- | (cc=0.4504) | info on Rv0275c/- |
| Rv2924c/fpg | (cc=0.4386) | info on Rv2924c/fpg |
| Rv0435c/- | (cc=0.4378) | info on Rv0435c/- |
Correlation of Rv0580c/- with Rv3652/PE_PGRS60
Normalized LFCs for Rv0580c/-:
(description and provenance of datasets)
| Rv0580c/- | Rv3652/PE_PGRS60 | |
| Fe_supp_jason_reseq | -1.179 | -0.27 |
| low_pH_jason_reseq | 0.276 | 1.079 |
| NO_jason_reseq | 0.331 | 0.186 |
| B6_jason_reseq | 0.837 | 0.641 |
| MHCII_jason_reseq | -0.232 | 0.67 |
| Isoniazid02 | 0.07 | 0.33 |
| Rifampicin4 | -0.374 | -0.217 |
| Ethambutol3 | -0.168 | 0.169 |
| Meropenem3 | -0.144 | 0.153 |
| Vancomycin16 | 0.127 | 1.101 |
| Rv2680_day32 | 1.147 | 2.801 |
| H37Rv_KO_MarP | 0.394 | 0.104 |
| hypoxia_3wks | 0.459 | 0.618 |
| hypoxia_6wks | 0.317 | 0.084 |
| glycerol | 0.503 | 0.62 |
| cholesterol | 0.039 | 0.779 |
| AJ | 0.237 | -0.111 |
| Bibs02 | -0.775 | 0.699 |
| Bibs02c | -1.488 | -0.573 |
| BL6 | -0.505 | -1.002 |
| BL6a | -0.88 | -0.512 |
| BXD01 | -0.978 | -0.249 |
| BXD010 | -0.707 | -0.837 |
| BXD011 | -0.94 | -0.305 |
| BXD03 | -1.726 | -1.399 |
| BXD04 | -0.452 | -0.409 |
| BXD05 | -1.344 | -0.534 |
| BXD06 | -0.579 | -0.522 |
| BXD07 | -1.139 | -0.716 |
| BXD08 | -0.946 | -0.091 |
| BXD09 | -0.776 | -0.683 |
| CAST | 0.12 | 0.155 |
| CCcont | -1.366 | -1.008 |
| DS01 | -0.527 | 0.712 |
| DS02 | -1.079 | -0.26 |
| DS04 | -1.806 | 0.557 |
| DS0c | 0.085 | -0.508 |
| GP01 | -0.903 | -0.386 |
| GP02 | -0.649 | 0.445 |
| GP0c | -0.45 | -0.907 |
| NOD | 0.488 | -0.462 |
| NZO | 0.026 | 0.262 |
| PWK | 0.236 | -0.618 |
| H37Rv_KO_CtpC | -0.233 | -2.385 |
| H37Rv_KO_CtpD | -1.333 | -1.86 |
| H37Rv_KO_Rv1272 | -1.648 | -0.668 |
| H37Rv_KO_SugABC | -1.778 | -1.701 |
| H37Rv_KO_MbtN | -0.23 | -0.861 |
| Trans05 | -1.928 | -1.511 |
| macrophage_unactivated | 0.208 | 0.114 |
| IL1 | 0.308 | 1.21 |
| Rapamycin | -0.918 | -0.377 |
| Tcell | -1.137 | -0.222 |
| GMCSF | 0.591 | 0.61 |
| IFNab | 0.2 | 1.233 |
| IFNg | -0.46 | -0.139 |
| IFNg_GMCSF1 | -0.635 | 0.138 |
| Rv1432_day32 | 0.507 | 0.343 |
| Rv1565c_day32 | 1.216 | 0.722 |
| secA2_input | 1.193 | -0.258 |
| delta_Rv3594 | -1.081 | -0.376 |
| delta_Rv3717 | -1.258 | 0.789 |
| delta_Rv3811 | -1.408 | -0.291 |
| delta_Rv0954 | -0.536 | 0.247 |
| PonA1 | -0.995 | -0.455 |
| EccD1_KO | -0.977 | 0.638 |
| EspI_KO | -0.516 | 0.428 |
| PE35_KO | -0.668 | 1.152 |
| PPE68_KO | -0.528 | 0.729 |
| glycerol2 | -0.083 | 0.42 |
| lignocerate | -0.766 | -0.161 |
| oleate | -0.112 | 0.961 |
| phosphatidylcholine | -0.168 | 0.193 |
| acetate | -0.901 | -0.091 |
| glucAc | -1.579 | -0.6 |
| Rv0950ko | 0.663 | -0.226 |
| Rv1096ko | 0.866 | 0.422 |
| Rv3684ko | 0.72 | 0.177 |
| delta_otsA_trehalose | 0.128 | 1.871 |