Top 10 genes with highest correlation to Rv0545c/pitA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0544c/- | (cc=0.8747) | info on Rv0544c/- |
| Rv0019c/fhaB | (cc=0.6245) | info on Rv0019c/fhaB |
| Rv1337/- | (cc=0.6172) | info on Rv1337/- |
| Rv1339/- | (cc=0.6158) | info on Rv1339/- |
| Rv3036c/TB22.2 | (cc=0.585) | info on Rv3036c/TB22.2 |
| Rv1780/- | (cc=0.5807) | info on Rv1780/- |
| Rv1640c/lysX | (cc=0.5709) | info on Rv1640c/lysX |
| Rv1336/cysM | (cc=0.5448) | info on Rv1336/cysM |
| Rv2173/idsA2 | (cc=0.5306) | info on Rv2173/idsA2 |
| Rv0176/- | (cc=0.53) | info on Rv0176/- |
Correlation of Rv0545c/pitA with Rv1640c/lysX
Normalized LFCs for Rv0545c/pitA:
(description and provenance of datasets)
| Rv0545c/pitA | Rv1640c/lysX | |
| Fe_supp_jason_reseq | -1.323 | 0.77 |
| low_pH_jason_reseq | -1.251 | -1.434 |
| NO_jason_reseq | -0.281 | -0.058 |
| B6_jason_reseq | -1.496 | 1.258 |
| MHCII_jason_reseq | -2.253 | 0.159 |
| Isoniazid02 | 0.327 | -1.263 |
| Rifampicin4 | 1.852 | -3.187 |
| Ethambutol3 | 2.309 | -2.24 |
| Meropenem3 | -0.543 | 0.879 |
| Vancomycin16 | 1.51 | -2.303 |
| Rv2680_day32 | 1.535 | 1.078 |
| H37Rv_KO_MarP | -0.409 | -2.764 |
| hypoxia_3wks | 2.536 | 4.366 |
| hypoxia_6wks | 2.297 | 3.111 |
| glycerol | 1.556 | -0.42 |
| cholesterol | 1.387 | -0.564 |
| AJ | -1.913 | -1.642 |
| Bibs02 | -1.24 | -0.498 |
| Bibs02c | -0.988 | 0.899 |
| BL6 | 0.058 | 0.906 |
| BL6a | -0.047 | 1.69 |
| BXD01 | 0.744 | 2.01 |
| BXD010 | 0.502 | 1.596 |
| BXD011 | 0.997 | 1.594 |
| BXD03 | 0.031 | 0.98 |
| BXD04 | 0.968 | 1.294 |
| BXD05 | 1.082 | 1.265 |
| BXD06 | 0.523 | 1.635 |
| BXD07 | 0.953 | 1.674 |
| BXD08 | 0.408 | 2.286 |
| BXD09 | 0.406 | 2.565 |
| CAST | -1.668 | -2.147 |
| CCcont | 1.485 | 1.12 |
| DS01 | -1.116 | 0.195 |
| DS02 | -0.654 | 0.247 |
| DS04 | -0.645 | 0.854 |
| DS0c | -1.904 | -0.115 |
| GP01 | 1.292 | 1.087 |
| GP02 | 0.797 | 1.427 |
| GP0c | 1.451 | 1.205 |
| NOD | -2.232 | -1.515 |
| NZO | -1.982 | -0.932 |
| PWK | -2.347 | -1.829 |
| H37Rv_KO_CtpC | 0.554 | 1.204 |
| H37Rv_KO_CtpD | -0.094 | 0.694 |
| H37Rv_KO_Rv1272 | -0.296 | 1.286 |
| H37Rv_KO_SugABC | 0.466 | 1.294 |
| H37Rv_KO_MbtN | 2.907 | 2.599 |
| Trans05 | 0.228 | 1.806 |
| macrophage_unactivated | 0.167 | -2.358 |
| IL1 | -2.966 | -1.465 |
| Rapamycin | -2.547 | -1.645 |
| Tcell | -1.274 | -1.147 |
| GMCSF | -1.096 | -1.719 |
| IFNab | 0.656 | -0.293 |
| IFNg | -1.515 | -0.919 |
| IFNg_GMCSF1 | -2.316 | -2.077 |
| Rv1432_day32 | 1.248 | 2.379 |
| Rv1565c_day32 | -1.767 | -2.854 |
| secA2_input | 0.235 | 0.864 |
| delta_Rv3594 | 3.341 | 1.628 |
| delta_Rv3717 | 2.665 | 3.157 |
| delta_Rv3811 | 2.822 | 1.46 |
| delta_Rv0954 | 0.811 | -0.261 |
| PonA1 | -1.154 | -0.856 |
| EccD1_KO | -1.697 | -1.332 |
| EspI_KO | -0.094 | -1.557 |
| PE35_KO | -1.835 | -2.15 |
| PPE68_KO | -2.013 | -1.296 |
| glycerol2 | -0.964 | -0.744 |
| lignocerate | -1.28 | -1.006 |
| oleate | -1.49 | -2.925 |
| phosphatidylcholine | -2.053 | -1.678 |
| acetate | 0.831 | 0.271 |
| glucAc | 0.099 | 0.236 |
| Rv0950ko | -0.193 | -1.128 |
| Rv1096ko | 0.32 | 0.093 |
| Rv3684ko | 0.393 | 1.055 |
| delta_otsA_trehalose | -0.671 | -0.468 |