Top 10 genes with highest correlation to Rv0545c/pitA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0544c/- | (cc=0.8747) | info on Rv0544c/- |
| Rv0019c/fhaB | (cc=0.6245) | info on Rv0019c/fhaB |
| Rv1337/- | (cc=0.6172) | info on Rv1337/- |
| Rv1339/- | (cc=0.6158) | info on Rv1339/- |
| Rv3036c/TB22.2 | (cc=0.585) | info on Rv3036c/TB22.2 |
| Rv1780/- | (cc=0.5807) | info on Rv1780/- |
| Rv1640c/lysX | (cc=0.5709) | info on Rv1640c/lysX |
| Rv1336/cysM | (cc=0.5448) | info on Rv1336/cysM |
| Rv2173/idsA2 | (cc=0.5306) | info on Rv2173/idsA2 |
| Rv0176/- | (cc=0.53) | info on Rv0176/- |
Correlation of Rv0545c/pitA with Rv0176/-
Normalized LFCs for Rv0545c/pitA:
(description and provenance of datasets)
| Rv0545c/pitA | Rv0176/- | |
| Fe_supp_jason_reseq | -1.323 | -0.81 |
| low_pH_jason_reseq | -1.251 | 1.268 |
| NO_jason_reseq | -0.281 | 2.659 |
| B6_jason_reseq | -1.496 | 0.249 |
| MHCII_jason_reseq | -2.253 | -1.942 |
| Isoniazid02 | 0.327 | 0.237 |
| Rifampicin4 | 1.852 | 1.803 |
| Ethambutol3 | 2.309 | 1.617 |
| Meropenem3 | -0.543 | 2.131 |
| Vancomycin16 | 1.51 | 1.963 |
| Rv2680_day32 | 1.535 | 0.076 |
| H37Rv_KO_MarP | -0.409 | 0.896 |
| hypoxia_3wks | 2.536 | 1.878 |
| hypoxia_6wks | 2.297 | 2.24 |
| glycerol | 1.556 | 1.777 |
| cholesterol | 1.387 | 5.769 |
| AJ | -1.913 | 0.476 |
| Bibs02 | -1.24 | -3.257 |
| Bibs02c | -0.988 | -1.758 |
| BL6 | 0.058 | -0.548 |
| BL6a | -0.047 | -0.72 |
| BXD01 | 0.744 | 1.566 |
| BXD010 | 0.502 | 0.482 |
| BXD011 | 0.997 | 1.161 |
| BXD03 | 0.031 | 1.029 |
| BXD04 | 0.968 | 0.753 |
| BXD05 | 1.082 | 1.464 |
| BXD06 | 0.523 | 0.728 |
| BXD07 | 0.953 | 1.32 |
| BXD08 | 0.408 | 1.071 |
| BXD09 | 0.406 | 1.447 |
| CAST | -1.668 | -1.251 |
| CCcont | 1.485 | 0.185 |
| DS01 | -1.116 | -1.403 |
| DS02 | -0.654 | -0.181 |
| DS04 | -0.645 | -0.496 |
| DS0c | -1.904 | -2.382 |
| GP01 | 1.292 | -1.24 |
| GP02 | 0.797 | -0.236 |
| GP0c | 1.451 | -0.068 |
| NOD | -2.232 | -0.864 |
| NZO | -1.982 | 1.371 |
| PWK | -2.347 | -1.378 |
| H37Rv_KO_CtpC | 0.554 | -0.824 |
| H37Rv_KO_CtpD | -0.094 | 0.972 |
| H37Rv_KO_Rv1272 | -0.296 | -0.441 |
| H37Rv_KO_SugABC | 0.466 | 0.956 |
| H37Rv_KO_MbtN | 2.907 | 1.027 |
| Trans05 | 0.228 | -0.173 |
| macrophage_unactivated | 0.167 | -0.821 |
| IL1 | -2.966 | -1.195 |
| Rapamycin | -2.547 | -2.102 |
| Tcell | -1.274 | -1.127 |
| GMCSF | -1.096 | -0.523 |
| IFNab | 0.656 | -0.109 |
| IFNg | -1.515 | 0.567 |
| IFNg_GMCSF1 | -2.316 | -0.434 |
| Rv1432_day32 | 1.248 | -0.3 |
| Rv1565c_day32 | -1.767 | -1.995 |
| secA2_input | 0.235 | -3.073 |
| delta_Rv3594 | 3.341 | 1.031 |
| delta_Rv3717 | 2.665 | 1.739 |
| delta_Rv3811 | 2.822 | 0.807 |
| delta_Rv0954 | 0.811 | 1.454 |
| PonA1 | -1.154 | 0.615 |
| EccD1_KO | -1.697 | -0.444 |
| EspI_KO | -0.094 | -0.168 |
| PE35_KO | -1.835 | -0.28 |
| PPE68_KO | -2.013 | -0.022 |
| glycerol2 | -0.964 | -0.123 |
| lignocerate | -1.28 | -2.384 |
| oleate | -1.49 | 1.004 |
| phosphatidylcholine | -2.053 | -0.77 |
| acetate | 0.831 | 1.162 |
| glucAc | 0.099 | 0.318 |
| Rv0950ko | -0.193 | -0.286 |
| Rv1096ko | 0.32 | -1.318 |
| Rv3684ko | 0.393 | 0.314 |
| delta_otsA_trehalose | -0.671 | 0.337 |