Top 10 genes with highest correlation to Rv0545c/pitA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0544c/- | (cc=0.8747) | info on Rv0544c/- |
| Rv0019c/fhaB | (cc=0.6245) | info on Rv0019c/fhaB |
| Rv1337/- | (cc=0.6172) | info on Rv1337/- |
| Rv1339/- | (cc=0.6158) | info on Rv1339/- |
| Rv3036c/TB22.2 | (cc=0.585) | info on Rv3036c/TB22.2 |
| Rv1780/- | (cc=0.5807) | info on Rv1780/- |
| Rv1640c/lysX | (cc=0.5709) | info on Rv1640c/lysX |
| Rv1336/cysM | (cc=0.5448) | info on Rv1336/cysM |
| Rv2173/idsA2 | (cc=0.5306) | info on Rv2173/idsA2 |
| Rv0176/- | (cc=0.53) | info on Rv0176/- |
Correlation of Rv0545c/pitA with Rv1336/cysM
Normalized LFCs for Rv0545c/pitA:
(description and provenance of datasets)
| Rv0545c/pitA | Rv1336/cysM | |
| Fe_supp_jason_reseq | -1.323 | 0.199 |
| low_pH_jason_reseq | -1.251 | 0.831 |
| NO_jason_reseq | -0.281 | 1.113 |
| B6_jason_reseq | -1.496 | 0.705 |
| MHCII_jason_reseq | -2.253 | -0.079 |
| Isoniazid02 | 0.327 | 1.385 |
| Rifampicin4 | 1.852 | 0.076 |
| Ethambutol3 | 2.309 | -0.593 |
| Meropenem3 | -0.543 | 0.628 |
| Vancomycin16 | 1.51 | 0.666 |
| Rv2680_day32 | 1.535 | 0.675 |
| H37Rv_KO_MarP | -0.409 | -0.425 |
| hypoxia_3wks | 2.536 | 2.213 |
| hypoxia_6wks | 2.297 | 4.042 |
| glycerol | 1.556 | -0.967 |
| cholesterol | 1.387 | 0.048 |
| AJ | -1.913 | -1.56 |
| Bibs02 | -1.24 | -1.444 |
| Bibs02c | -0.988 | -1.203 |
| BL6 | 0.058 | 1.43 |
| BL6a | -0.047 | 1.05 |
| BXD01 | 0.744 | 2.221 |
| BXD010 | 0.502 | 1.974 |
| BXD011 | 0.997 | 3.102 |
| BXD03 | 0.031 | 1.156 |
| BXD04 | 0.968 | 1.994 |
| BXD05 | 1.082 | 1.724 |
| BXD06 | 0.523 | 2.328 |
| BXD07 | 0.953 | 2.6 |
| BXD08 | 0.408 | 2.71 |
| BXD09 | 0.406 | 1.771 |
| CAST | -1.668 | -0.594 |
| CCcont | 1.485 | 0.248 |
| DS01 | -1.116 | -1.632 |
| DS02 | -0.654 | -1.306 |
| DS04 | -0.645 | -0.136 |
| DS0c | -1.904 | -1.194 |
| GP01 | 1.292 | 1.134 |
| GP02 | 0.797 | 0.251 |
| GP0c | 1.451 | 1.595 |
| NOD | -2.232 | -1.128 |
| NZO | -1.982 | 0.23 |
| PWK | -2.347 | -0.469 |
| H37Rv_KO_CtpC | 0.554 | -0.578 |
| H37Rv_KO_CtpD | -0.094 | 0.006 |
| H37Rv_KO_Rv1272 | -0.296 | 1.298 |
| H37Rv_KO_SugABC | 0.466 | 0.836 |
| H37Rv_KO_MbtN | 2.907 | 2.209 |
| Trans05 | 0.228 | 1.733 |
| macrophage_unactivated | 0.167 | -2.061 |
| IL1 | -2.966 | -0.163 |
| Rapamycin | -2.547 | -0.915 |
| Tcell | -1.274 | 0.29 |
| GMCSF | -1.096 | -1.428 |
| IFNab | 0.656 | 0.115 |
| IFNg | -1.515 | -0.901 |
| IFNg_GMCSF1 | -2.316 | -1.024 |
| Rv1432_day32 | 1.248 | 0.846 |
| Rv1565c_day32 | -1.767 | -1.439 |
| secA2_input | 0.235 | 0.227 |
| delta_Rv3594 | 3.341 | 0.858 |
| delta_Rv3717 | 2.665 | 2.129 |
| delta_Rv3811 | 2.822 | 1.103 |
| delta_Rv0954 | 0.811 | -0.291 |
| PonA1 | -1.154 | -0.995 |
| EccD1_KO | -1.697 | 0.22 |
| EspI_KO | -0.094 | 0.088 |
| PE35_KO | -1.835 | -0.715 |
| PPE68_KO | -2.013 | 0.016 |
| glycerol2 | -0.964 | -0.206 |
| lignocerate | -1.28 | -2.133 |
| oleate | -1.49 | 2.606 |
| phosphatidylcholine | -2.053 | -1.732 |
| acetate | 0.831 | -0.073 |
| glucAc | 0.099 | -0.255 |
| Rv0950ko | -0.193 | -0.633 |
| Rv1096ko | 0.32 | -0.305 |
| Rv3684ko | 0.393 | 0.308 |
| delta_otsA_trehalose | -0.671 | -0.053 |