Top 10 genes with highest correlation to Rv0545c/pitA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0544c/- | (cc=0.8747) | info on Rv0544c/- |
| Rv0019c/fhaB | (cc=0.6245) | info on Rv0019c/fhaB |
| Rv1337/- | (cc=0.6172) | info on Rv1337/- |
| Rv1339/- | (cc=0.6158) | info on Rv1339/- |
| Rv3036c/TB22.2 | (cc=0.585) | info on Rv3036c/TB22.2 |
| Rv1780/- | (cc=0.5807) | info on Rv1780/- |
| Rv1640c/lysX | (cc=0.5709) | info on Rv1640c/lysX |
| Rv1336/cysM | (cc=0.5448) | info on Rv1336/cysM |
| Rv2173/idsA2 | (cc=0.5306) | info on Rv2173/idsA2 |
| Rv0176/- | (cc=0.53) | info on Rv0176/- |
Correlation of Rv0545c/pitA with Rv1339/-
Normalized LFCs for Rv0545c/pitA:
(description and provenance of datasets)
| Rv0545c/pitA | Rv1339/- | |
| Fe_supp_jason_reseq | -1.323 | 0.725 |
| low_pH_jason_reseq | -1.251 | -0.323 |
| NO_jason_reseq | -0.281 | -1.089 |
| B6_jason_reseq | -1.496 | -0.552 |
| MHCII_jason_reseq | -2.253 | 0.492 |
| Isoniazid02 | 0.327 | -0.773 |
| Rifampicin4 | 1.852 | 0.073 |
| Ethambutol3 | 2.309 | -0.597 |
| Meropenem3 | -0.543 | 0.586 |
| Vancomycin16 | 1.51 | 0.35 |
| Rv2680_day32 | 1.535 | 0.0 |
| H37Rv_KO_MarP | -0.409 | -2.406 |
| hypoxia_3wks | 2.536 | 4.865 |
| hypoxia_6wks | 2.297 | 6.0 |
| glycerol | 1.556 | -0.202 |
| cholesterol | 1.387 | -0.145 |
| AJ | -1.913 | 0.0 |
| Bibs02 | -1.24 | -0.183 |
| Bibs02c | -0.988 | -0.209 |
| BL6 | 0.058 | -0.125 |
| BL6a | -0.047 | 0.776 |
| BXD01 | 0.744 | 1.004 |
| BXD010 | 0.502 | 2.357 |
| BXD011 | 0.997 | 1.093 |
| BXD03 | 0.031 | 2.022 |
| BXD04 | 0.968 | 4.206 |
| BXD05 | 1.082 | 1.098 |
| BXD06 | 0.523 | 1.996 |
| BXD07 | 0.953 | 0.63 |
| BXD08 | 0.408 | 0.899 |
| BXD09 | 0.406 | 1.018 |
| CAST | -1.668 | -0.23 |
| CCcont | 1.485 | 3.245 |
| DS01 | -1.116 | -0.236 |
| DS02 | -0.654 | -0.217 |
| DS04 | -0.645 | 2.566 |
| DS0c | -1.904 | -0.217 |
| GP01 | 1.292 | -0.099 |
| GP02 | 0.797 | -0.083 |
| GP0c | 1.451 | 0.51 |
| NOD | -2.232 | -0.225 |
| NZO | -1.982 | -0.199 |
| PWK | -2.347 | -0.196 |
| H37Rv_KO_CtpC | 0.554 | 2.233 |
| H37Rv_KO_CtpD | -0.094 | 0.791 |
| H37Rv_KO_Rv1272 | -0.296 | 0.356 |
| H37Rv_KO_SugABC | 0.466 | 2.448 |
| H37Rv_KO_MbtN | 2.907 | 5.506 |
| Trans05 | 0.228 | 0.228 |
| macrophage_unactivated | 0.167 | -6.0 |
| IL1 | -2.966 | -4.242 |
| Rapamycin | -2.547 | -6.0 |
| Tcell | -1.274 | -4.774 |
| GMCSF | -1.096 | -5.365 |
| IFNab | 0.656 | 0.327 |
| IFNg | -1.515 | -3.555 |
| IFNg_GMCSF1 | -2.316 | -3.101 |
| Rv1432_day32 | 1.248 | 0.0 |
| Rv1565c_day32 | -1.767 | -0.182 |
| secA2_input | 0.235 | -3.035 |
| delta_Rv3594 | 3.341 | 4.748 |
| delta_Rv3717 | 2.665 | 5.474 |
| delta_Rv3811 | 2.822 | 4.579 |
| delta_Rv0954 | 0.811 | 1.096 |
| PonA1 | -1.154 | -0.717 |
| EccD1_KO | -1.697 | -4.746 |
| EspI_KO | -0.094 | -4.269 |
| PE35_KO | -1.835 | -5.061 |
| PPE68_KO | -2.013 | -4.086 |
| glycerol2 | -0.964 | -0.531 |
| lignocerate | -1.28 | -0.462 |
| oleate | -1.49 | 0.0 |
| phosphatidylcholine | -2.053 | -0.531 |
| acetate | 0.831 | -0.63 |
| glucAc | 0.099 | -0.392 |
| Rv0950ko | -0.193 | -2.376 |
| Rv1096ko | 0.32 | -1.65 |
| Rv3684ko | 0.393 | -2.898 |
| delta_otsA_trehalose | -0.671 | -0.055 |