Top 10 genes with highest correlation to Rv0523c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0571c/- | (cc=0.5714) | info on Rv0571c/- |
| Rv1291c/- | (cc=0.553) | info on Rv1291c/- |
| Rv2766c/- | (cc=0.5213) | info on Rv2766c/- |
| Rv1192/- | (cc=0.5164) | info on Rv1192/- |
| Rv2920c/amt | (cc=0.5155) | info on Rv2920c/amt |
| Rv3607c/folB | (cc=0.5078) | info on Rv3607c/folB |
| Rv3395c/- | (cc=0.4927) | info on Rv3395c/- |
| Rv0569/- | (cc=0.4905) | info on Rv0569/- |
| Rv0899/ompA | (cc=0.4901) | info on Rv0899/ompA |
| Rv1075c/- | (cc=0.4884) | info on Rv1075c/- |
Correlation of Rv0523c/- with Rv0899/ompA
Normalized LFCs for Rv0523c/-:
(description and provenance of datasets)
| Rv0523c/- | Rv0899/ompA | |
| Fe_supp_jason_reseq | -0.737 | -0.253 |
| low_pH_jason_reseq | -0.475 | -0.795 |
| NO_jason_reseq | 0.249 | -0.651 |
| B6_jason_reseq | 0.596 | 1.151 |
| MHCII_jason_reseq | 1.125 | 1.096 |
| Isoniazid02 | 0.204 | -0.125 |
| Rifampicin4 | 0.271 | 0.558 |
| Ethambutol3 | 0.491 | 0.309 |
| Meropenem3 | -0.151 | -0.034 |
| Vancomycin16 | 0.454 | 0.483 |
| Rv2680_day32 | 0.057 | -0.012 |
| H37Rv_KO_MarP | 0.229 | 0.282 |
| hypoxia_3wks | -0.423 | 0.0 |
| hypoxia_6wks | 0.094 | -0.359 |
| glycerol | -0.26 | -0.974 |
| cholesterol | -0.297 | -0.597 |
| AJ | -0.402 | -0.662 |
| Bibs02 | 0.109 | 0.733 |
| Bibs02c | 0.444 | -0.794 |
| BL6 | -0.94 | 0.411 |
| BL6a | -0.189 | -0.595 |
| BXD01 | 0.264 | 0.795 |
| BXD010 | -0.055 | 0.689 |
| BXD011 | -0.781 | -0.345 |
| BXD03 | 0.309 | 0.226 |
| BXD04 | 0.274 | -0.133 |
| BXD05 | -0.477 | -0.128 |
| BXD06 | 0.149 | -0.094 |
| BXD07 | -0.228 | 0.219 |
| BXD08 | -0.323 | 0.689 |
| BXD09 | -0.483 | 0.108 |
| CAST | 0.194 | 0.177 |
| CCcont | -0.895 | 0.321 |
| DS01 | 0.616 | 0.327 |
| DS02 | 0.496 | 0.838 |
| DS04 | -0.015 | 0.306 |
| DS0c | 0.256 | 0.695 |
| GP01 | 0.041 | -1.872 |
| GP02 | -0.789 | -1.771 |
| GP0c | -0.481 | -1.435 |
| NOD | 0.156 | -0.449 |
| NZO | -0.283 | 0.215 |
| PWK | 0.674 | 0.348 |
| H37Rv_KO_CtpC | -1.086 | 0.192 |
| H37Rv_KO_CtpD | -0.982 | -1.398 |
| H37Rv_KO_Rv1272 | -0.753 | -2.109 |
| H37Rv_KO_SugABC | -1.402 | -1.529 |
| H37Rv_KO_MbtN | -1.265 | -0.844 |
| Trans05 | 0.237 | -0.678 |
| macrophage_unactivated | -0.59 | 0.0 |
| IL1 | -0.816 | -0.917 |
| Rapamycin | -0.488 | -1.083 |
| Tcell | 0.316 | -0.173 |
| GMCSF | -0.42 | -0.76 |
| IFNab | -0.71 | -1.134 |
| IFNg | -0.957 | -0.714 |
| IFNg_GMCSF1 | 0.079 | -1.04 |
| Rv1432_day32 | 0.233 | -0.412 |
| Rv1565c_day32 | -1.567 | -0.199 |
| secA2_input | 0.086 | 0.881 |
| delta_Rv3594 | 0.948 | 1.958 |
| delta_Rv3717 | 0.927 | 1.258 |
| delta_Rv3811 | 0.631 | 0.766 |
| delta_Rv0954 | 0.678 | 1.005 |
| PonA1 | 0.0 | 1.114 |
| EccD1_KO | 0.747 | 1.253 |
| EspI_KO | 0.242 | 0.622 |
| PE35_KO | -0.312 | 0.283 |
| PPE68_KO | -0.026 | 1.459 |
| glycerol2 | 0.35 | -0.025 |
| lignocerate | 0.239 | 0.638 |
| oleate | 0.81 | -0.693 |
| phosphatidylcholine | 0.283 | 0.261 |
| acetate | -0.17 | 0.953 |
| glucAc | -0.555 | 1.757 |
| Rv0950ko | -0.13 | 0.184 |
| Rv1096ko | -0.024 | -0.609 |
| Rv3684ko | 0.056 | -0.662 |
| delta_otsA_trehalose | -0.739 | 0.048 |