Top 10 genes with highest correlation to Rv0523c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0571c/- | (cc=0.5714) | info on Rv0571c/- |
| Rv1291c/- | (cc=0.553) | info on Rv1291c/- |
| Rv2766c/- | (cc=0.5213) | info on Rv2766c/- |
| Rv1192/- | (cc=0.5164) | info on Rv1192/- |
| Rv2920c/amt | (cc=0.5155) | info on Rv2920c/amt |
| Rv3607c/folB | (cc=0.5078) | info on Rv3607c/folB |
| Rv3395c/- | (cc=0.4927) | info on Rv3395c/- |
| Rv0569/- | (cc=0.4905) | info on Rv0569/- |
| Rv0899/ompA | (cc=0.4901) | info on Rv0899/ompA |
| Rv1075c/- | (cc=0.4884) | info on Rv1075c/- |
Correlation of Rv0523c/- with Rv0569/-
Normalized LFCs for Rv0523c/-:
(description and provenance of datasets)
| Rv0523c/- | Rv0569/- | |
| Fe_supp_jason_reseq | -0.737 | -1.485 |
| low_pH_jason_reseq | -0.475 | -0.716 |
| NO_jason_reseq | 0.249 | -0.252 |
| B6_jason_reseq | 0.596 | 1.587 |
| MHCII_jason_reseq | 1.125 | 1.691 |
| Isoniazid02 | 0.204 | -0.192 |
| Rifampicin4 | 0.271 | 0.154 |
| Ethambutol3 | 0.491 | 1.679 |
| Meropenem3 | -0.151 | -0.053 |
| Vancomycin16 | 0.454 | 0.528 |
| Rv2680_day32 | 0.057 | -0.348 |
| H37Rv_KO_MarP | 0.229 | -0.461 |
| hypoxia_3wks | -0.423 | -0.08 |
| hypoxia_6wks | 0.094 | -0.75 |
| glycerol | -0.26 | -0.43 |
| cholesterol | -0.297 | -0.452 |
| AJ | -0.402 | -0.294 |
| Bibs02 | 0.109 | 0.691 |
| Bibs02c | 0.444 | -1.079 |
| BL6 | -0.94 | -0.127 |
| BL6a | -0.189 | -1.181 |
| BXD01 | 0.264 | -0.636 |
| BXD010 | -0.055 | -1.186 |
| BXD011 | -0.781 | -1.267 |
| BXD03 | 0.309 | -1.296 |
| BXD04 | 0.274 | 0.528 |
| BXD05 | -0.477 | -1.498 |
| BXD06 | 0.149 | -1.592 |
| BXD07 | -0.228 | -1.04 |
| BXD08 | -0.323 | -1.694 |
| BXD09 | -0.483 | -1.476 |
| CAST | 0.194 | -0.506 |
| CCcont | -0.895 | -1.548 |
| DS01 | 0.616 | 0.373 |
| DS02 | 0.496 | 0.165 |
| DS04 | -0.015 | -0.202 |
| DS0c | 0.256 | 0.178 |
| GP01 | 0.041 | 0.776 |
| GP02 | -0.789 | 1.362 |
| GP0c | -0.481 | -0.815 |
| NOD | 0.156 | 0.171 |
| NZO | -0.283 | -0.686 |
| PWK | 0.674 | -0.361 |
| H37Rv_KO_CtpC | -1.086 | -1.599 |
| H37Rv_KO_CtpD | -0.982 | -1.699 |
| H37Rv_KO_Rv1272 | -0.753 | -1.84 |
| H37Rv_KO_SugABC | -1.402 | -2.259 |
| H37Rv_KO_MbtN | -1.265 | -2.547 |
| Trans05 | 0.237 | -1.505 |
| macrophage_unactivated | -0.59 | -0.148 |
| IL1 | -0.816 | -0.178 |
| Rapamycin | -0.488 | -1.356 |
| Tcell | 0.316 | -0.544 |
| GMCSF | -0.42 | -0.618 |
| IFNab | -0.71 | -0.142 |
| IFNg | -0.957 | -0.216 |
| IFNg_GMCSF1 | 0.079 | -1.373 |
| Rv1432_day32 | 0.233 | -0.508 |
| Rv1565c_day32 | -1.567 | 0.199 |
| secA2_input | 0.086 | 0.805 |
| delta_Rv3594 | 0.948 | -0.184 |
| delta_Rv3717 | 0.927 | 0.297 |
| delta_Rv3811 | 0.631 | 0.593 |
| delta_Rv0954 | 0.678 | -0.518 |
| PonA1 | 0.0 | 0.128 |
| EccD1_KO | 0.747 | 0.428 |
| EspI_KO | 0.242 | 0.459 |
| PE35_KO | -0.312 | -0.099 |
| PPE68_KO | -0.026 | -0.205 |
| glycerol2 | 0.35 | 1.08 |
| lignocerate | 0.239 | -0.408 |
| oleate | 0.81 | 1.253 |
| phosphatidylcholine | 0.283 | 0.255 |
| acetate | -0.17 | -0.49 |
| glucAc | -0.555 | -1.225 |
| Rv0950ko | -0.13 | 0.0 |
| Rv1096ko | -0.024 | 0.452 |
| Rv3684ko | 0.056 | 0.131 |
| delta_otsA_trehalose | -0.739 | 1.266 |