Top 10 genes with highest correlation to Rv0513/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0175/- | (cc=0.6685) | info on Rv0175/- |
| Rv0174/mce1F | (cc=0.6344) | info on Rv0174/mce1F |
| Rv0169/mce1A | (cc=0.6275) | info on Rv0169/mce1A |
| Rv0177/- | (cc=0.6092) | info on Rv0177/- |
| Rv0178/- | (cc=0.607) | info on Rv0178/- |
| Rv0200/- | (cc=0.5933) | info on Rv0200/- |
| Rv0173/lprK | (cc=0.5783) | info on Rv0173/lprK |
| Rv0171/mce1C | (cc=0.5753) | info on Rv0171/mce1C |
| Rv0199/- | (cc=0.5718) | info on Rv0199/- |
| Rv0172/mce1D | (cc=0.5708) | info on Rv0172/mce1D |
Correlation of Rv0513/- with Rv0200/-
Normalized LFCs for Rv0513/-:
(description and provenance of datasets)
| Rv0513/- | Rv0200/- | |
| Fe_supp_jason_reseq | 1.348 | -1.018 |
| low_pH_jason_reseq | 0.028 | 0.482 |
| NO_jason_reseq | 2.14 | 2.578 |
| B6_jason_reseq | 0.656 | -1.954 |
| MHCII_jason_reseq | -0.505 | -2.778 |
| Isoniazid02 | 0.428 | -0.204 |
| Rifampicin4 | 1.768 | 2.125 |
| Ethambutol3 | -0.133 | -0.045 |
| Meropenem3 | 1.127 | 1.61 |
| Vancomycin16 | 1.573 | 2.228 |
| Rv2680_day32 | 0.255 | -2.419 |
| H37Rv_KO_MarP | -0.648 | -0.087 |
| hypoxia_3wks | 2.715 | 3.042 |
| hypoxia_6wks | 1.547 | 2.907 |
| glycerol | -0.102 | -1.358 |
| cholesterol | -0.127 | 2.34 |
| AJ | -0.203 | -2.573 |
| Bibs02 | -0.564 | -3.424 |
| Bibs02c | -3.106 | -3.606 |
| BL6 | -1.071 | -1.715 |
| BL6a | -2.438 | -2.356 |
| BXD01 | -1.145 | -0.451 |
| BXD010 | -0.69 | 0.472 |
| BXD011 | -0.929 | 0.22 |
| BXD03 | -1.158 | 1.553 |
| BXD04 | 0.489 | -0.549 |
| BXD05 | -0.055 | -0.346 |
| BXD06 | -0.552 | -0.593 |
| BXD07 | -0.465 | -0.057 |
| BXD08 | -0.784 | -0.319 |
| BXD09 | -1.235 | 0.437 |
| CAST | -2.334 | -2.466 |
| CCcont | -0.181 | 0.698 |
| DS01 | -2.05 | -3.239 |
| DS02 | 1.045 | -1.2 |
| DS04 | -0.235 | -2.566 |
| DS0c | -1.738 | -2.167 |
| GP01 | -1.979 | -1.849 |
| GP02 | -1.468 | -1.627 |
| GP0c | 0.575 | 0.017 |
| NOD | -0.98 | -2.672 |
| NZO | 0.9 | -0.225 |
| PWK | -1.317 | -3.123 |
| H37Rv_KO_CtpC | -1.733 | -0.474 |
| H37Rv_KO_CtpD | -1.88 | -1.265 |
| H37Rv_KO_Rv1272 | 0.028 | 0.351 |
| H37Rv_KO_SugABC | -1.671 | -0.189 |
| H37Rv_KO_MbtN | 1.318 | 0.235 |
| Trans05 | 0.547 | -0.452 |
| macrophage_unactivated | -1.496 | -1.436 |
| IL1 | -0.469 | 1.56 |
| Rapamycin | -0.071 | 1.63 |
| Tcell | -1.476 | -1.3 |
| GMCSF | -1.362 | -0.227 |
| IFNab | -0.209 | -0.466 |
| IFNg | -0.468 | 0.286 |
| IFNg_GMCSF1 | -1.144 | -1.31 |
| Rv1432_day32 | 0.0 | -3.027 |
| Rv1565c_day32 | -1.865 | -4.235 |
| secA2_input | -1.359 | -1.008 |
| delta_Rv3594 | 0.907 | 0.185 |
| delta_Rv3717 | 0.323 | 0.131 |
| delta_Rv3811 | 0.302 | -0.653 |
| delta_Rv0954 | 0.127 | -0.275 |
| PonA1 | -0.405 | 0.944 |
| EccD1_KO | -0.812 | 1.464 |
| EspI_KO | -0.896 | 0.365 |
| PE35_KO | -1.243 | -0.767 |
| PPE68_KO | -0.179 | 0.291 |
| glycerol2 | -0.436 | -0.918 |
| lignocerate | -1.847 | -1.93 |
| oleate | 1.072 | 1.662 |
| phosphatidylcholine | -0.461 | -0.592 |
| acetate | 0.484 | 1.485 |
| glucAc | -0.029 | 0.338 |
| Rv0950ko | -0.573 | 1.39 |
| Rv1096ko | 0.458 | 0.959 |
| Rv3684ko | 0.924 | -0.318 |
| delta_otsA_trehalose | 1.065 | 0.392 |