Top 10 genes with highest correlation to Rv0513/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0175/- | (cc=0.6685) | info on Rv0175/- |
| Rv0174/mce1F | (cc=0.6344) | info on Rv0174/mce1F |
| Rv0169/mce1A | (cc=0.6275) | info on Rv0169/mce1A |
| Rv0177/- | (cc=0.6092) | info on Rv0177/- |
| Rv0178/- | (cc=0.607) | info on Rv0178/- |
| Rv0200/- | (cc=0.5933) | info on Rv0200/- |
| Rv0173/lprK | (cc=0.5783) | info on Rv0173/lprK |
| Rv0171/mce1C | (cc=0.5753) | info on Rv0171/mce1C |
| Rv0199/- | (cc=0.5718) | info on Rv0199/- |
| Rv0172/mce1D | (cc=0.5708) | info on Rv0172/mce1D |
Correlation of Rv0513/- with Rv0177/-
Normalized LFCs for Rv0513/-:
(description and provenance of datasets)
| Rv0513/- | Rv0177/- | |
| Fe_supp_jason_reseq | 1.348 | 1.246 |
| low_pH_jason_reseq | 0.028 | 0.308 |
| NO_jason_reseq | 2.14 | 2.625 |
| B6_jason_reseq | 0.656 | 1.323 |
| MHCII_jason_reseq | -0.505 | -1.067 |
| Isoniazid02 | 0.428 | -0.739 |
| Rifampicin4 | 1.768 | 1.47 |
| Ethambutol3 | -0.133 | -1.012 |
| Meropenem3 | 1.127 | 1.842 |
| Vancomycin16 | 1.573 | 1.65 |
| Rv2680_day32 | 0.255 | 2.782 |
| H37Rv_KO_MarP | -0.648 | 0.264 |
| hypoxia_3wks | 2.715 | 1.336 |
| hypoxia_6wks | 1.547 | 1.359 |
| glycerol | -0.102 | -0.263 |
| cholesterol | -0.127 | 0.556 |
| AJ | -0.203 | -0.345 |
| Bibs02 | -0.564 | -2.5 |
| Bibs02c | -3.106 | -2.448 |
| BL6 | -1.071 | -0.075 |
| BL6a | -2.438 | -2.451 |
| BXD01 | -1.145 | -0.944 |
| BXD010 | -0.69 | -1.216 |
| BXD011 | -0.929 | -0.304 |
| BXD03 | -1.158 | -1.084 |
| BXD04 | 0.489 | -1.845 |
| BXD05 | -0.055 | -0.865 |
| BXD06 | -0.552 | -1.583 |
| BXD07 | -0.465 | -0.903 |
| BXD08 | -0.784 | -1.113 |
| BXD09 | -1.235 | -1.176 |
| CAST | -2.334 | -1.121 |
| CCcont | -0.181 | -1.848 |
| DS01 | -2.05 | -2.404 |
| DS02 | 1.045 | -2.617 |
| DS04 | -0.235 | -0.756 |
| DS0c | -1.738 | -3.386 |
| GP01 | -1.979 | -1.43 |
| GP02 | -1.468 | -1.319 |
| GP0c | 0.575 | -1.399 |
| NOD | -0.98 | -1.272 |
| NZO | 0.9 | 1.81 |
| PWK | -1.317 | -1.485 |
| H37Rv_KO_CtpC | -1.733 | -1.586 |
| H37Rv_KO_CtpD | -1.88 | -1.567 |
| H37Rv_KO_Rv1272 | 0.028 | -0.687 |
| H37Rv_KO_SugABC | -1.671 | 0.629 |
| H37Rv_KO_MbtN | 1.318 | -0.281 |
| Trans05 | 0.547 | -0.294 |
| macrophage_unactivated | -1.496 | -1.354 |
| IL1 | -0.469 | -1.987 |
| Rapamycin | -0.071 | -2.056 |
| Tcell | -1.476 | -2.63 |
| GMCSF | -1.362 | -0.401 |
| IFNab | -0.209 | 0.242 |
| IFNg | -0.468 | -0.345 |
| IFNg_GMCSF1 | -1.144 | 0.129 |
| Rv1432_day32 | 0.0 | 0.795 |
| Rv1565c_day32 | -1.865 | -0.12 |
| secA2_input | -1.359 | -2.674 |
| delta_Rv3594 | 0.907 | 0.17 |
| delta_Rv3717 | 0.323 | 0.853 |
| delta_Rv3811 | 0.302 | -0.156 |
| delta_Rv0954 | 0.127 | 1.043 |
| PonA1 | -0.405 | -0.157 |
| EccD1_KO | -0.812 | -0.382 |
| EspI_KO | -0.896 | -0.128 |
| PE35_KO | -1.243 | -0.131 |
| PPE68_KO | -0.179 | 0.141 |
| glycerol2 | -0.436 | -1.197 |
| lignocerate | -1.847 | -2.809 |
| oleate | 1.072 | 0.631 |
| phosphatidylcholine | -0.461 | -1.627 |
| acetate | 0.484 | -0.447 |
| glucAc | -0.029 | -1.561 |
| Rv0950ko | -0.573 | -1.26 |
| Rv1096ko | 0.458 | -0.835 |
| Rv3684ko | 0.924 | -0.377 |
| delta_otsA_trehalose | 1.065 | -1.304 |