Top 10 genes with highest correlation to Rv0500/proC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2927c/- | (cc=0.5319) | info on Rv2927c/- |
| Rv0821c/phoY2 | (cc=0.4574) | info on Rv0821c/phoY2 |
| Rv2751/- | (cc=0.4485) | info on Rv2751/- |
| Rv3922c/- | (cc=0.4361) | info on Rv3922c/- |
| Rv2530c/vapC39 | (cc=0.4292) | info on Rv2530c/vapC39 |
| Rv1418/lprH | (cc=0.429) | info on Rv1418/lprH |
| Rv0364/- | (cc=0.4256) | info on Rv0364/- |
| Rv0926c/- | (cc=0.4228) | info on Rv0926c/- |
| Rv3841/bfrB | (cc=0.418) | info on Rv3841/bfrB |
| Rv1720c/vapC12 | (cc=0.4063) | info on Rv1720c/vapC12 |
Correlation of Rv0500/proC with Rv2927c/-
Normalized LFCs for Rv0500/proC:
(description and provenance of datasets)
| Rv0500/proC | Rv2927c/- | |
| Fe_supp_jason_reseq | -0.415 | -0.625 |
| low_pH_jason_reseq | -0.44 | -0.663 |
| NO_jason_reseq | 0.583 | 0.0 |
| B6_jason_reseq | -0.292 | -1.314 |
| MHCII_jason_reseq | -0.257 | -1.035 |
| Isoniazid02 | 0.0 | 0.119 |
| Rifampicin4 | -0.341 | 0.0 |
| Ethambutol3 | -0.153 | 0.676 |
| Meropenem3 | 0.497 | 0.799 |
| Vancomycin16 | -0.698 | -0.48 |
| Rv2680_day32 | 0.0 | -0.119 |
| H37Rv_KO_MarP | 0.553 | 0.971 |
| hypoxia_3wks | -1.388 | -1.089 |
| hypoxia_6wks | -1.013 | -1.792 |
| glycerol | 0.0 | -0.234 |
| cholesterol | 0.0 | -0.696 |
| AJ | 0.0 | -0.741 |
| Bibs02 | 0.0 | -0.452 |
| Bibs02c | 0.0 | 0.768 |
| BL6 | 0.0 | -0.145 |
| BL6a | 0.973 | 0.65 |
| BXD01 | 0.0 | 0.26 |
| BXD010 | 0.543 | 0.893 |
| BXD011 | 0.35 | 0.734 |
| BXD03 | 0.907 | 0.903 |
| BXD04 | 0.236 | -0.49 |
| BXD05 | 0.975 | 1.244 |
| BXD06 | 0.469 | 0.072 |
| BXD07 | 0.851 | 1.113 |
| BXD08 | 1.096 | 0.071 |
| BXD09 | 1.753 | 0.939 |
| CAST | 0.0 | 0.24 |
| CCcont | 0.0 | 0.428 |
| DS01 | 0.0 | 0.246 |
| DS02 | 0.0 | -0.862 |
| DS04 | 0.0 | -0.769 |
| DS0c | 0.0 | 0.0 |
| GP01 | 0.0 | -0.662 |
| GP02 | 0.0 | -0.558 |
| GP0c | 0.0 | -0.872 |
| NOD | 0.0 | 1.687 |
| NZO | 0.0 | 0.655 |
| PWK | 0.0 | -0.111 |
| H37Rv_KO_CtpC | 0.0 | -0.78 |
| H37Rv_KO_CtpD | 0.0 | 0.068 |
| H37Rv_KO_Rv1272 | 0.0 | 0.673 |
| H37Rv_KO_SugABC | 0.0 | -0.476 |
| H37Rv_KO_MbtN | 0.0 | 0.527 |
| Trans05 | 0.131 | -0.746 |
| macrophage_unactivated | 0.884 | 1.556 |
| IL1 | -0.658 | 0.59 |
| Rapamycin | 0.0 | 0.316 |
| Tcell | -0.349 | 0.169 |
| GMCSF | 0.0 | 1.497 |
| IFNab | 0.0 | 0.602 |
| IFNg | 1.376 | 1.612 |
| IFNg_GMCSF1 | 1.386 | 0.163 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | -1.21 |
| secA2_input | 0.545 | -0.11 |
| delta_Rv3594 | 0.211 | 1.741 |
| delta_Rv3717 | 0.174 | 0.736 |
| delta_Rv3811 | 0.721 | 1.878 |
| delta_Rv0954 | 0.627 | 0.0 |
| PonA1 | 0.437 | 2.038 |
| EccD1_KO | -1.273 | -0.395 |
| EspI_KO | 0.87 | -0.342 |
| PE35_KO | -1.129 | -2.15 |
| PPE68_KO | -0.579 | -0.589 |
| glycerol2 | -0.369 | -0.555 |
| lignocerate | -0.32 | 0.135 |
| oleate | -0.373 | -1.679 |
| phosphatidylcholine | -0.368 | -0.353 |
| acetate | -0.437 | -0.199 |
| glucAc | -0.272 | 0.0 |
| Rv0950ko | 1.049 | -0.639 |
| Rv1096ko | 0.38 | 0.727 |
| Rv3684ko | -0.452 | 0.603 |
| delta_otsA_trehalose | -0.133 | 0.133 |