Top 10 genes with highest correlation to Rv0483/lprQ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1823/- | (cc=0.6835) | info on Rv1823/- |
| Rv2203/- | (cc=0.6803) | info on Rv2203/- |
| Rv1825/- | (cc=0.6361) | info on Rv1825/- |
| Rv3586/- | (cc=0.5988) | info on Rv3586/- |
| Rv0012/- | (cc=0.5968) | info on Rv0012/- |
| Rv2171/lppM | (cc=0.5947) | info on Rv2171/lppM |
| Rv0265c/- | (cc=0.5658) | info on Rv0265c/- |
| Rv1635c/- | (cc=0.4926) | info on Rv1635c/- |
| Rv0538/- | (cc=0.4671) | info on Rv0538/- |
| Rv0313/- | (cc=0.4575) | info on Rv0313/- |
Correlation of Rv0483/lprQ with Rv3586/-
Normalized LFCs for Rv0483/lprQ:
(description and provenance of datasets)
| Rv0483/lprQ | Rv3586/- | |
| Fe_supp_jason_reseq | 0.944 | 2.344 |
| low_pH_jason_reseq | 0.402 | 1.847 |
| NO_jason_reseq | -1.139 | 0.845 |
| B6_jason_reseq | 0.621 | 1.59 |
| MHCII_jason_reseq | 1.322 | 2.226 |
| Isoniazid02 | -0.064 | -0.687 |
| Rifampicin4 | -0.986 | -0.69 |
| Ethambutol3 | -0.601 | -1.021 |
| Meropenem3 | 0.04 | -1.064 |
| Vancomycin16 | -1.817 | -2.902 |
| Rv2680_day32 | 0.398 | -1.792 |
| H37Rv_KO_MarP | 1.634 | 6.0 |
| hypoxia_3wks | 0.443 | 1.4 |
| hypoxia_6wks | -0.159 | -1.119 |
| glycerol | 0.989 | 1.181 |
| cholesterol | 0.409 | -0.481 |
| AJ | -0.188 | -0.721 |
| Bibs02 | 0.07 | -0.303 |
| Bibs02c | 0.343 | -0.032 |
| BL6 | -0.172 | -3.174 |
| BL6a | -0.227 | -0.637 |
| BXD01 | -0.541 | -2.831 |
| BXD010 | -0.508 | -1.672 |
| BXD011 | -0.304 | -2.203 |
| BXD03 | -0.797 | -3.689 |
| BXD04 | -0.634 | -3.034 |
| BXD05 | -0.651 | -2.44 |
| BXD06 | -0.698 | -3.275 |
| BXD07 | -0.508 | -2.394 |
| BXD08 | -0.606 | -3.16 |
| BXD09 | -0.583 | -3.143 |
| CAST | -0.334 | -1.74 |
| CCcont | 0.352 | -1.531 |
| DS01 | -0.094 | -1.711 |
| DS02 | -0.315 | -1.678 |
| DS04 | -0.894 | -0.583 |
| DS0c | 0.36 | 0.033 |
| GP01 | 0.152 | -0.953 |
| GP02 | -0.415 | -0.962 |
| GP0c | 0.179 | -1.387 |
| NOD | -0.241 | -1.526 |
| NZO | -0.195 | -0.442 |
| PWK | -1.421 | -3.167 |
| H37Rv_KO_CtpC | 0.972 | -1.177 |
| H37Rv_KO_CtpD | 0.019 | -0.806 |
| H37Rv_KO_Rv1272 | 0.259 | -2.981 |
| H37Rv_KO_SugABC | -0.402 | -2.094 |
| H37Rv_KO_MbtN | -0.382 | -0.864 |
| Trans05 | -0.409 | -0.594 |
| macrophage_unactivated | 0.016 | -3.156 |
| IL1 | -0.314 | -1.157 |
| Rapamycin | 0.212 | -2.418 |
| Tcell | -0.701 | -2.16 |
| GMCSF | 0.908 | -2.445 |
| IFNab | 0.082 | -1.826 |
| IFNg | -0.163 | -1.614 |
| IFNg_GMCSF1 | -0.016 | -1.898 |
| Rv1432_day32 | 0.143 | -1.4 |
| Rv1565c_day32 | 0.42 | 0.445 |
| secA2_input | 0.62 | 1.392 |
| delta_Rv3594 | 0.222 | 0.509 |
| delta_Rv3717 | -0.685 | -0.877 |
| delta_Rv3811 | 0.031 | -0.518 |
| delta_Rv0954 | -0.384 | -0.805 |
| PonA1 | -0.077 | 0.194 |
| EccD1_KO | -0.599 | -2.799 |
| EspI_KO | -0.322 | -3.325 |
| PE35_KO | -0.379 | -0.394 |
| PPE68_KO | -0.912 | -1.894 |
| glycerol2 | 0.339 | -1.97 |
| lignocerate | 0.386 | -0.943 |
| oleate | -0.172 | -2.098 |
| phosphatidylcholine | 0.56 | -1.084 |
| acetate | -0.465 | -0.045 |
| glucAc | -0.285 | 0.0 |
| Rv0950ko | 0.778 | 1.746 |
| Rv1096ko | -0.35 | -0.691 |
| Rv3684ko | 0.036 | 1.313 |
| delta_otsA_trehalose | 0.308 | 0.474 |