Top 10 genes with highest correlation to Rv0483/lprQ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1823/- | (cc=0.6835) | info on Rv1823/- |
| Rv2203/- | (cc=0.6803) | info on Rv2203/- |
| Rv1825/- | (cc=0.6361) | info on Rv1825/- |
| Rv3586/- | (cc=0.5988) | info on Rv3586/- |
| Rv0012/- | (cc=0.5968) | info on Rv0012/- |
| Rv2171/lppM | (cc=0.5947) | info on Rv2171/lppM |
| Rv0265c/- | (cc=0.5658) | info on Rv0265c/- |
| Rv1635c/- | (cc=0.4926) | info on Rv1635c/- |
| Rv0538/- | (cc=0.4671) | info on Rv0538/- |
| Rv0313/- | (cc=0.4575) | info on Rv0313/- |
Correlation of Rv0483/lprQ with Rv0012/-
Normalized LFCs for Rv0483/lprQ:
(description and provenance of datasets)
| Rv0483/lprQ | Rv0012/- | |
| Fe_supp_jason_reseq | 0.944 | 2.161 |
| low_pH_jason_reseq | 0.402 | 1.171 |
| NO_jason_reseq | -1.139 | 0.583 |
| B6_jason_reseq | 0.621 | 0.692 |
| MHCII_jason_reseq | 1.322 | 1.143 |
| Isoniazid02 | -0.064 | -1.404 |
| Rifampicin4 | -0.986 | -1.633 |
| Ethambutol3 | -0.601 | -1.597 |
| Meropenem3 | 0.04 | -0.944 |
| Vancomycin16 | -1.817 | -2.608 |
| Rv2680_day32 | 0.398 | -2.492 |
| H37Rv_KO_MarP | 1.634 | 6.0 |
| hypoxia_3wks | 0.443 | -0.57 |
| hypoxia_6wks | -0.159 | -1.52 |
| glycerol | 0.989 | 0.604 |
| cholesterol | 0.409 | -0.78 |
| AJ | -0.188 | -1.649 |
| Bibs02 | 0.07 | -0.183 |
| Bibs02c | 0.343 | -1.249 |
| BL6 | -0.172 | -2.486 |
| BL6a | -0.227 | -2.414 |
| BXD01 | -0.541 | -2.712 |
| BXD010 | -0.508 | -2.488 |
| BXD011 | -0.304 | -1.935 |
| BXD03 | -0.797 | -3.729 |
| BXD04 | -0.634 | -3.195 |
| BXD05 | -0.651 | -2.349 |
| BXD06 | -0.698 | -2.995 |
| BXD07 | -0.508 | -3.37 |
| BXD08 | -0.606 | -3.333 |
| BXD09 | -0.583 | -3.073 |
| CAST | -0.334 | -2.659 |
| CCcont | 0.352 | 0.069 |
| DS01 | -0.094 | -2.091 |
| DS02 | -0.315 | -1.925 |
| DS04 | -0.894 | -1.945 |
| DS0c | 0.36 | -0.702 |
| GP01 | 0.152 | -1.876 |
| GP02 | -0.415 | -2.085 |
| GP0c | 0.179 | -1.327 |
| NOD | -0.241 | -0.854 |
| NZO | -0.195 | -2.263 |
| PWK | -1.421 | -2.39 |
| H37Rv_KO_CtpC | 0.972 | -2.015 |
| H37Rv_KO_CtpD | 0.019 | 0.206 |
| H37Rv_KO_Rv1272 | 0.259 | -0.876 |
| H37Rv_KO_SugABC | -0.402 | -2.281 |
| H37Rv_KO_MbtN | -0.382 | -1.659 |
| Trans05 | -0.409 | -2.234 |
| macrophage_unactivated | 0.016 | -1.774 |
| IL1 | -0.314 | 0.394 |
| Rapamycin | 0.212 | -0.611 |
| Tcell | -0.701 | -0.313 |
| GMCSF | 0.908 | -1.307 |
| IFNab | 0.082 | -1.911 |
| IFNg | -0.163 | -1.323 |
| IFNg_GMCSF1 | -0.016 | -1.354 |
| Rv1432_day32 | 0.143 | -2.293 |
| Rv1565c_day32 | 0.42 | -0.186 |
| secA2_input | 0.62 | 2.074 |
| delta_Rv3594 | 0.222 | -0.084 |
| delta_Rv3717 | -0.685 | -1.37 |
| delta_Rv3811 | 0.031 | 0.242 |
| delta_Rv0954 | -0.384 | 0.26 |
| PonA1 | -0.077 | 0.74 |
| EccD1_KO | -0.599 | -2.815 |
| EspI_KO | -0.322 | -2.9 |
| PE35_KO | -0.379 | -0.073 |
| PPE68_KO | -0.912 | -1.587 |
| glycerol2 | 0.339 | -1.772 |
| lignocerate | 0.386 | -1.29 |
| oleate | -0.172 | -2.28 |
| phosphatidylcholine | 0.56 | -0.598 |
| acetate | -0.465 | 0.389 |
| glucAc | -0.285 | 0.07 |
| Rv0950ko | 0.778 | 0.832 |
| Rv1096ko | -0.35 | -3.049 |
| Rv3684ko | 0.036 | 0.141 |
| delta_otsA_trehalose | 0.308 | 1.33 |