Top 10 genes with highest correlation to Rv0481c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3367/PE_PGRS51 | (cc=0.6395) | info on Rv3367/PE_PGRS51 |
| Rv0359/- | (cc=0.5913) | info on Rv0359/- |
| Rv1843c/guaB1 | (cc=0.589) | info on Rv1843c/guaB1 |
| Rv3401/- | (cc=0.5851) | info on Rv3401/- |
| Rv0435c/- | (cc=0.582) | info on Rv0435c/- |
| Rv3471c/- | (cc=0.5721) | info on Rv3471c/- |
| Rv0648/- | (cc=0.5597) | info on Rv0648/- |
| Rv2490c/PE_PGRS43 | (cc=0.5592) | info on Rv2490c/PE_PGRS43 |
| Rv0080/- | (cc=0.5545) | info on Rv0080/- |
| Rv0203/- | (cc=0.5542) | info on Rv0203/- |
Correlation of Rv0481c/- with Rv3471c/-
Normalized LFCs for Rv0481c/-:
(description and provenance of datasets)
| Rv0481c/- | Rv3471c/- | |
| Fe_supp_jason_reseq | -0.313 | -1.039 |
| low_pH_jason_reseq | -0.597 | 0.458 |
| NO_jason_reseq | 0.158 | 0.701 |
| B6_jason_reseq | 1.168 | 0.733 |
| MHCII_jason_reseq | 1.121 | 0.702 |
| Isoniazid02 | 0.792 | 0.029 |
| Rifampicin4 | 0.0 | -0.141 |
| Ethambutol3 | 0.558 | 1.375 |
| Meropenem3 | 0.182 | 0.184 |
| Vancomycin16 | -0.239 | -0.645 |
| Rv2680_day32 | -0.113 | -0.576 |
| H37Rv_KO_MarP | 0.677 | 0.25 |
| hypoxia_3wks | -0.259 | 0.339 |
| hypoxia_6wks | -0.338 | -1.094 |
| glycerol | 1.186 | 0.584 |
| cholesterol | 0.775 | -0.519 |
| AJ | 0.538 | 0.619 |
| Bibs02 | 0.411 | 1.052 |
| Bibs02c | 0.415 | 0.611 |
| BL6 | -1.194 | -1.711 |
| BL6a | -0.531 | -0.103 |
| BXD01 | -1.312 | -1.823 |
| BXD010 | -1.31 | -0.834 |
| BXD011 | -0.663 | -1.306 |
| BXD03 | -1.036 | -2.321 |
| BXD04 | -0.591 | -2.531 |
| BXD05 | -1.108 | -1.95 |
| BXD06 | -0.875 | -0.818 |
| BXD07 | -0.931 | -1.567 |
| BXD08 | -0.971 | -1.758 |
| BXD09 | -1.291 | -2.295 |
| CAST | 0.672 | -0.058 |
| CCcont | -1.173 | -3.101 |
| DS01 | 0.756 | 1.381 |
| DS02 | 0.696 | 1.063 |
| DS04 | 0.517 | 1.831 |
| DS0c | 0.006 | 1.299 |
| GP01 | -0.041 | -1.785 |
| GP02 | -0.177 | -1.78 |
| GP0c | -0.77 | -0.888 |
| NOD | 0.635 | -0.713 |
| NZO | 1.124 | -0.316 |
| PWK | 0.404 | 0.45 |
| H37Rv_KO_CtpC | -1.256 | -0.434 |
| H37Rv_KO_CtpD | 0.874 | 0.744 |
| H37Rv_KO_Rv1272 | 0.037 | -0.565 |
| H37Rv_KO_SugABC | 0.618 | 0.741 |
| H37Rv_KO_MbtN | -0.133 | 1.908 |
| Trans05 | -0.31 | -0.157 |
| macrophage_unactivated | -0.742 | 0.379 |
| IL1 | 0.264 | -0.095 |
| Rapamycin | -0.875 | -0.35 |
| Tcell | -0.701 | -1.284 |
| GMCSF | 0.57 | -0.679 |
| IFNab | -0.535 | -0.949 |
| IFNg | -0.957 | 0.043 |
| IFNg_GMCSF1 | 0.33 | 0.556 |
| Rv1432_day32 | 2.15 | 1.237 |
| Rv1565c_day32 | -0.768 | -1.099 |
| secA2_input | 0.258 | -0.085 |
| delta_Rv3594 | 0.288 | 0.153 |
| delta_Rv3717 | -0.427 | 0.033 |
| delta_Rv3811 | 0.199 | -1.5 |
| delta_Rv0954 | 0.236 | -0.14 |
| PonA1 | 0.342 | 0.179 |
| EccD1_KO | -0.135 | 0.082 |
| EspI_KO | -0.183 | 0.385 |
| PE35_KO | -1.438 | -0.023 |
| PPE68_KO | -1.267 | 0.054 |
| glycerol2 | -1.03 | -0.963 |
| lignocerate | -0.598 | -0.634 |
| oleate | -1.438 | -0.373 |
| phosphatidylcholine | -1.179 | -0.686 |
| acetate | 0.09 | -0.667 |
| glucAc | 0.056 | -0.415 |
| Rv0950ko | 0.492 | -0.184 |
| Rv1096ko | 0.293 | 0.027 |
| Rv3684ko | 0.956 | -0.724 |
| delta_otsA_trehalose | -0.716 | 0.289 |