Top 10 genes with highest correlation to Rv0481c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3367/PE_PGRS51 | (cc=0.6395) | info on Rv3367/PE_PGRS51 |
| Rv0359/- | (cc=0.5913) | info on Rv0359/- |
| Rv1843c/guaB1 | (cc=0.589) | info on Rv1843c/guaB1 |
| Rv3401/- | (cc=0.5851) | info on Rv3401/- |
| Rv0435c/- | (cc=0.582) | info on Rv0435c/- |
| Rv3471c/- | (cc=0.5721) | info on Rv3471c/- |
| Rv0648/- | (cc=0.5597) | info on Rv0648/- |
| Rv2490c/PE_PGRS43 | (cc=0.5592) | info on Rv2490c/PE_PGRS43 |
| Rv0080/- | (cc=0.5545) | info on Rv0080/- |
| Rv0203/- | (cc=0.5542) | info on Rv0203/- |
Correlation of Rv0481c/- with Rv3401/-
Normalized LFCs for Rv0481c/-:
(description and provenance of datasets)
| Rv0481c/- | Rv3401/- | |
| Fe_supp_jason_reseq | -0.313 | 0.0 |
| low_pH_jason_reseq | -0.597 | -0.659 |
| NO_jason_reseq | 0.158 | -0.026 |
| B6_jason_reseq | 1.168 | 0.695 |
| MHCII_jason_reseq | 1.121 | 0.952 |
| Isoniazid02 | 0.792 | 0.383 |
| Rifampicin4 | 0.0 | 0.244 |
| Ethambutol3 | 0.558 | 0.72 |
| Meropenem3 | 0.182 | 1.518 |
| Vancomycin16 | -0.239 | -0.082 |
| Rv2680_day32 | -0.113 | 1.336 |
| H37Rv_KO_MarP | 0.677 | 0.23 |
| hypoxia_3wks | -0.259 | -0.068 |
| hypoxia_6wks | -0.338 | -0.035 |
| glycerol | 1.186 | -0.053 |
| cholesterol | 0.775 | 1.523 |
| AJ | 0.538 | -0.131 |
| Bibs02 | 0.411 | 0.567 |
| Bibs02c | 0.415 | -0.156 |
| BL6 | -1.194 | -0.906 |
| BL6a | -0.531 | -0.97 |
| BXD01 | -1.312 | -0.89 |
| BXD010 | -1.31 | -0.854 |
| BXD011 | -0.663 | -0.556 |
| BXD03 | -1.036 | -0.564 |
| BXD04 | -0.591 | -0.606 |
| BXD05 | -1.108 | -0.793 |
| BXD06 | -0.875 | -1.097 |
| BXD07 | -0.931 | -0.687 |
| BXD08 | -0.971 | -0.624 |
| BXD09 | -1.291 | -0.892 |
| CAST | 0.672 | 0.269 |
| CCcont | -1.173 | -1.095 |
| DS01 | 0.756 | 0.548 |
| DS02 | 0.696 | 0.421 |
| DS04 | 0.517 | 0.602 |
| DS0c | 0.006 | 0.404 |
| GP01 | -0.041 | 0.349 |
| GP02 | -0.177 | 0.307 |
| GP0c | -0.77 | -0.109 |
| NOD | 0.635 | 0.906 |
| NZO | 1.124 | -0.205 |
| PWK | 0.404 | -0.354 |
| H37Rv_KO_CtpC | -1.256 | -0.54 |
| H37Rv_KO_CtpD | 0.874 | 0.537 |
| H37Rv_KO_Rv1272 | 0.037 | -0.305 |
| H37Rv_KO_SugABC | 0.618 | -0.478 |
| H37Rv_KO_MbtN | -0.133 | -0.036 |
| Trans05 | -0.31 | 0.384 |
| macrophage_unactivated | -0.742 | -0.925 |
| IL1 | 0.264 | -0.97 |
| Rapamycin | -0.875 | -0.829 |
| Tcell | -0.701 | -0.671 |
| GMCSF | 0.57 | -0.57 |
| IFNab | -0.535 | -1.022 |
| IFNg | -0.957 | -0.123 |
| IFNg_GMCSF1 | 0.33 | 0.251 |
| Rv1432_day32 | 2.15 | 0.757 |
| Rv1565c_day32 | -0.768 | 0.763 |
| secA2_input | 0.258 | 0.261 |
| delta_Rv3594 | 0.288 | -0.223 |
| delta_Rv3717 | -0.427 | -0.227 |
| delta_Rv3811 | 0.199 | -0.235 |
| delta_Rv0954 | 0.236 | 0.088 |
| PonA1 | 0.342 | 0.323 |
| EccD1_KO | -0.135 | -0.033 |
| EspI_KO | -0.183 | -0.086 |
| PE35_KO | -1.438 | -0.146 |
| PPE68_KO | -1.267 | -0.16 |
| glycerol2 | -1.03 | 0.083 |
| lignocerate | -0.598 | -0.571 |
| oleate | -1.438 | -0.647 |
| phosphatidylcholine | -1.179 | -0.13 |
| acetate | 0.09 | -0.191 |
| glucAc | 0.056 | -0.389 |
| Rv0950ko | 0.492 | 0.093 |
| Rv1096ko | 0.293 | 0.184 |
| Rv3684ko | 0.956 | -0.105 |
| delta_otsA_trehalose | -0.716 | 0.465 |