Top 10 genes with highest correlation to Rv0470c/pcaA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2563/- | (cc=0.633) | info on Rv2563/- |
| Rv2383c/mbtB | (cc=0.6258) | info on Rv2383c/mbtB |
| Rv2564/glnQ | (cc=0.6006) | info on Rv2564/glnQ |
| Rv1592c/- | (cc=0.5992) | info on Rv1592c/- |
| Rv2381c/mbtD | (cc=0.5888) | info on Rv2381c/mbtD |
| Rv0407/fgd1 | (cc=0.5841) | info on Rv0407/fgd1 |
| Rv2239c/- | (cc=0.5759) | info on Rv2239c/- |
| Rv0561c/- | (cc=0.5758) | info on Rv0561c/- |
| Rv1432/- | (cc=0.5728) | info on Rv1432/- |
| Rv1349/irtB | (cc=0.5537) | info on Rv1349/irtB |
Correlation of Rv0470c/pcaA with Rv2563/-
Normalized LFCs for Rv0470c/pcaA:
(description and provenance of datasets)
| Rv0470c/pcaA | Rv2563/- | |
| Fe_supp_jason_reseq | 5.522 | 1.514 |
| low_pH_jason_reseq | 3.346 | 0.0 |
| NO_jason_reseq | -2.263 | -4.161 |
| B6_jason_reseq | -1.11 | -2.7 |
| MHCII_jason_reseq | -0.842 | -2.378 |
| Isoniazid02 | -0.37 | 0.677 |
| Rifampicin4 | 0.996 | -1.868 |
| Ethambutol3 | 1.299 | 2.152 |
| Meropenem3 | -0.673 | -1.269 |
| Vancomycin16 | 1.979 | -0.488 |
| Rv2680_day32 | -2.939 | -1.894 |
| H37Rv_KO_MarP | -0.284 | 0.364 |
| hypoxia_3wks | -4.737 | -2.939 |
| hypoxia_6wks | -3.46 | -3.627 |
| glycerol | 2.07 | 1.156 |
| cholesterol | 0.509 | 0.46 |
| AJ | -1.681 | -4.323 |
| Bibs02 | -1.917 | -0.13 |
| Bibs02c | 0.459 | -0.149 |
| BL6 | -1.198 | -2.974 |
| BL6a | -0.462 | -1.34 |
| BXD01 | -1.496 | -3.227 |
| BXD010 | -1.227 | -3.045 |
| BXD011 | -0.756 | -2.167 |
| BXD03 | -1.553 | -2.443 |
| BXD04 | -1.42 | -2.94 |
| BXD05 | -1.411 | -3.2 |
| BXD06 | -1.064 | -3.307 |
| BXD07 | -1.21 | -3.167 |
| BXD08 | -1.394 | -3.162 |
| BXD09 | -1.473 | -3.341 |
| CAST | -1.23 | -2.194 |
| CCcont | 2.083 | -0.754 |
| DS01 | 1.261 | 1.932 |
| DS02 | 1.686 | 1.281 |
| DS04 | 0.0 | 1.206 |
| DS0c | 0.217 | 1.634 |
| GP01 | -1.134 | -2.446 |
| GP02 | -0.955 | -2.061 |
| GP0c | -1.493 | -3.221 |
| NOD | 0.0 | -0.898 |
| NZO | -1.91 | -3.835 |
| PWK | -1.289 | 0.665 |
| H37Rv_KO_CtpC | 0.309 | -1.997 |
| H37Rv_KO_CtpD | -0.139 | -1.089 |
| H37Rv_KO_Rv1272 | -1.478 | -1.451 |
| H37Rv_KO_SugABC | -0.949 | -1.736 |
| H37Rv_KO_MbtN | -0.385 | -2.191 |
| Trans05 | -1.041 | -2.988 |
| macrophage_unactivated | 2.964 | 1.411 |
| IL1 | -0.374 | -1.64 |
| Rapamycin | -0.387 | -0.651 |
| Tcell | 3.812 | -1.212 |
| GMCSF | -0.333 | -1.212 |
| IFNab | 0.0 | 0.729 |
| IFNg | -0.703 | -2.028 |
| IFNg_GMCSF1 | -0.826 | -0.434 |
| Rv1432_day32 | -0.343 | -0.884 |
| Rv1565c_day32 | 2.088 | 2.504 |
| secA2_input | -2.926 | 0.127 |
| delta_Rv3594 | -0.679 | -2.496 |
| delta_Rv3717 | -0.487 | -2.054 |
| delta_Rv3811 | -0.66 | -2.427 |
| delta_Rv0954 | 3.358 | 2.344 |
| PonA1 | 4.067 | 2.92 |
| EccD1_KO | -0.839 | -0.743 |
| EspI_KO | -1.298 | 1.395 |
| PE35_KO | 1.485 | 2.013 |
| PPE68_KO | -0.39 | 1.67 |
| glycerol2 | -2.371 | -3.095 |
| lignocerate | -1.058 | -1.315 |
| oleate | -1.733 | -3.265 |
| phosphatidylcholine | -1.95 | -1.693 |
| acetate | 0.419 | -0.893 |
| glucAc | 0.456 | -0.881 |
| Rv0950ko | -1.625 | 0.841 |
| Rv1096ko | -0.766 | 1.013 |
| Rv3684ko | -0.537 | -0.079 |
| delta_otsA_trehalose | -0.973 | -1.192 |