Top 10 genes with highest correlation to Rv0463/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2833c/ugpB | (cc=0.5193) | info on Rv2833c/ugpB |
| Rv1931c/- | (cc=0.5052) | info on Rv1931c/- |
| Rv2151c/ftsQ | (cc=0.4516) | info on Rv2151c/ftsQ |
| Rv2251/- | (cc=0.4489) | info on Rv2251/- |
| Rv1574/- | (cc=0.4478) | info on Rv1574/- |
| Rv2620c/- | (cc=0.4382) | info on Rv2620c/- |
| Rv0318c/- | (cc=0.4317) | info on Rv0318c/- |
| Rv0494/- | (cc=0.4242) | info on Rv0494/- |
| Rv0728c/serA2 | (cc=0.4207) | info on Rv0728c/serA2 |
| Rv2970A/- | (cc=0.4164) | info on Rv2970A/- |
Correlation of Rv0463/- with Rv2833c/ugpB
Normalized LFCs for Rv0463/-:
(description and provenance of datasets)
| Rv0463/- | Rv2833c/ugpB | |
| Fe_supp_jason_reseq | -0.008 | -1.047 |
| low_pH_jason_reseq | -0.403 | -0.855 |
| NO_jason_reseq | -0.677 | -0.496 |
| B6_jason_reseq | -1.18 | -2.495 |
| MHCII_jason_reseq | -1.029 | -1.705 |
| Isoniazid02 | 0.274 | 0.323 |
| Rifampicin4 | 0.246 | 1.283 |
| Ethambutol3 | 0.507 | 0.505 |
| Meropenem3 | 1.163 | 0.497 |
| Vancomycin16 | 0.992 | 0.939 |
| Rv2680_day32 | 0.272 | 1.035 |
| H37Rv_KO_MarP | 0.612 | -0.188 |
| hypoxia_3wks | -0.666 | 0.0 |
| hypoxia_6wks | -0.15 | -0.234 |
| glycerol | -0.413 | -0.693 |
| cholesterol | -1.723 | 0.552 |
| AJ | -1.213 | -0.541 |
| Bibs02 | 0.762 | -0.736 |
| Bibs02c | 1.006 | -1.429 |
| BL6 | 0.576 | 1.972 |
| BL6a | 0.428 | 1.025 |
| BXD01 | 0.418 | 0.8 |
| BXD010 | -0.866 | 1.237 |
| BXD011 | 0.7 | 0.812 |
| BXD03 | -0.718 | 1.088 |
| BXD04 | 0.113 | 0.67 |
| BXD05 | 0.048 | 0.391 |
| BXD06 | -0.146 | 0.91 |
| BXD07 | 0.137 | 1.167 |
| BXD08 | 0.201 | 1.509 |
| BXD09 | 0.128 | 1.334 |
| CAST | -0.022 | 2.478 |
| CCcont | 1.167 | 1.651 |
| DS01 | -0.2 | -0.551 |
| DS02 | 0.124 | 0.699 |
| DS04 | -1.698 | -0.905 |
| DS0c | -1.103 | -0.506 |
| GP01 | -1.374 | -0.086 |
| GP02 | -1.038 | -0.568 |
| GP0c | -0.652 | -0.237 |
| NOD | -1.077 | 0.0 |
| NZO | 0.416 | 0.309 |
| PWK | -0.091 | -0.915 |
| H37Rv_KO_CtpC | 0.014 | 1.177 |
| H37Rv_KO_CtpD | -0.982 | -1.086 |
| H37Rv_KO_Rv1272 | -0.169 | 1.385 |
| H37Rv_KO_SugABC | -1.953 | -0.949 |
| H37Rv_KO_MbtN | -0.343 | -0.625 |
| Trans05 | 1.108 | 1.851 |
| macrophage_unactivated | 0.565 | 0.65 |
| IL1 | 1.026 | 0.392 |
| Rapamycin | 0.654 | 0.921 |
| Tcell | 1.144 | 0.903 |
| GMCSF | 1.141 | 0.731 |
| IFNab | 1.022 | 0.163 |
| IFNg | 1.053 | 0.216 |
| IFNg_GMCSF1 | 0.305 | 0.17 |
| Rv1432_day32 | -0.43 | -0.961 |
| Rv1565c_day32 | -0.144 | -0.24 |
| secA2_input | -0.601 | 0.095 |
| delta_Rv3594 | -1.196 | -0.402 |
| delta_Rv3717 | -1.763 | -0.802 |
| delta_Rv3811 | -0.971 | -0.651 |
| delta_Rv0954 | -0.994 | -0.45 |
| PonA1 | -1.825 | -0.799 |
| EccD1_KO | -0.335 | -1.47 |
| EspI_KO | 0.927 | 0.091 |
| PE35_KO | 0.808 | 0.443 |
| PPE68_KO | 0.064 | 0.202 |
| glycerol2 | 0.977 | 0.873 |
| lignocerate | 0.718 | 1.376 |
| oleate | 0.217 | 0.489 |
| phosphatidylcholine | 0.462 | 1.108 |
| acetate | 0.903 | 1.079 |
| glucAc | 0.123 | 1.205 |
| Rv0950ko | 1.309 | 0.582 |
| Rv1096ko | 0.214 | 0.995 |
| Rv3684ko | -0.449 | 1.588 |
| delta_otsA_trehalose | -1.296 | -1.327 |