Top 10 genes with highest correlation to Rv0463/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2833c/ugpB | (cc=0.5193) | info on Rv2833c/ugpB |
Rv1931c/- | (cc=0.5052) | info on Rv1931c/- |
Rv2151c/ftsQ | (cc=0.4516) | info on Rv2151c/ftsQ |
Rv2251/- | (cc=0.4489) | info on Rv2251/- |
Rv1574/- | (cc=0.4478) | info on Rv1574/- |
Rv2620c/- | (cc=0.4382) | info on Rv2620c/- |
Rv0318c/- | (cc=0.4317) | info on Rv0318c/- |
Rv0494/- | (cc=0.4242) | info on Rv0494/- |
Rv0728c/serA2 | (cc=0.4207) | info on Rv0728c/serA2 |
Rv2970A/- | (cc=0.4164) | info on Rv2970A/- |
Correlation of Rv0463/- with Rv0728c/serA2
Normalized LFCs for Rv0463/-:
(description and provenance of datasets)
Rv0463/- | Rv0728c/serA2 | |
Fe_supp_jason_reseq | -0.008 | 0.584 |
low_pH_jason_reseq | -0.403 | -0.744 |
NO_jason_reseq | -0.677 | -0.494 |
B6_jason_reseq | -1.18 | -0.184 |
MHCII_jason_reseq | -1.029 | -0.151 |
Isoniazid02 | 0.274 | 0.068 |
Rifampicin4 | 0.246 | 0.349 |
Ethambutol3 | 0.507 | 0.0 |
Meropenem3 | 1.163 | 1.656 |
Vancomycin16 | 0.992 | 0.822 |
Rv2680_day32 | 0.272 | -0.252 |
H37Rv_KO_MarP | 0.612 | 0.246 |
hypoxia_3wks | -0.666 | 0.387 |
hypoxia_6wks | -0.15 | 0.679 |
glycerol | -0.413 | -0.471 |
cholesterol | -1.723 | -0.371 |
AJ | -1.213 | 0.282 |
Bibs02 | 0.762 | -0.832 |
Bibs02c | 1.006 | 0.42 |
BL6 | 0.576 | 0.407 |
BL6a | 0.428 | 0.336 |
BXD01 | 0.418 | 0.242 |
BXD010 | -0.866 | 0.989 |
BXD011 | 0.7 | 1.865 |
BXD03 | -0.718 | 0.127 |
BXD04 | 0.113 | 0.472 |
BXD05 | 0.048 | 0.818 |
BXD06 | -0.146 | 0.666 |
BXD07 | 0.137 | 0.462 |
BXD08 | 0.201 | 0.752 |
BXD09 | 0.128 | 0.624 |
CAST | -0.022 | 0.342 |
CCcont | 1.167 | -0.076 |
DS01 | -0.2 | -0.26 |
DS02 | 0.124 | -0.969 |
DS04 | -1.698 | -0.707 |
DS0c | -1.103 | -0.625 |
GP01 | -1.374 | -0.703 |
GP02 | -1.038 | -1.195 |
GP0c | -0.652 | -0.776 |
NOD | -1.077 | -0.456 |
NZO | 0.416 | 0.538 |
PWK | -0.091 | -0.151 |
H37Rv_KO_CtpC | 0.014 | 0.896 |
H37Rv_KO_CtpD | -0.982 | -1.949 |
H37Rv_KO_Rv1272 | -0.169 | 0.626 |
H37Rv_KO_SugABC | -1.953 | 0.361 |
H37Rv_KO_MbtN | -0.343 | 0.712 |
Trans05 | 1.108 | 0.327 |
macrophage_unactivated | 0.565 | 0.0 |
IL1 | 1.026 | 0.056 |
Rapamycin | 0.654 | 0.678 |
Tcell | 1.144 | 0.244 |
GMCSF | 1.141 | 0.116 |
IFNab | 1.022 | 0.0 |
IFNg | 1.053 | 0.361 |
IFNg_GMCSF1 | 0.305 | 0.71 |
Rv1432_day32 | -0.43 | 1.709 |
Rv1565c_day32 | -0.144 | 0.392 |
secA2_input | -0.601 | 0.044 |
delta_Rv3594 | -1.196 | -1.418 |
delta_Rv3717 | -1.763 | -0.603 |
delta_Rv3811 | -0.971 | -0.931 |
delta_Rv0954 | -0.994 | -0.848 |
PonA1 | -1.825 | 0.07 |
EccD1_KO | -0.335 | 0.026 |
EspI_KO | 0.927 | 0.242 |
PE35_KO | 0.808 | -0.166 |
PPE68_KO | 0.064 | -0.624 |
glycerol2 | 0.977 | 0.242 |
lignocerate | 0.718 | 0.407 |
oleate | 0.217 | 0.047 |
phosphatidylcholine | 0.462 | 0.113 |
acetate | 0.903 | -0.113 |
glucAc | 0.123 | 0.116 |
Rv0950ko | 1.309 | 0.078 |
Rv1096ko | 0.214 | -0.133 |
Rv3684ko | -0.449 | -0.413 |
delta_otsA_trehalose | -1.296 | -0.68 |