TnSeqCorr

Top 10 genes with highest correlation to Rv0463/-:

update plotcorrelationlink to info on gene
Rv2833c/ugpB (cc=0.5193) info on Rv2833c/ugpB
Rv1931c/- (cc=0.5052) info on Rv1931c/-
Rv2151c/ftsQ (cc=0.4516) info on Rv2151c/ftsQ
Rv2251/- (cc=0.4489) info on Rv2251/-
Rv1574/- (cc=0.4478) info on Rv1574/-
Rv2620c/- (cc=0.4382) info on Rv2620c/-
Rv0318c/- (cc=0.4317) info on Rv0318c/-
Rv0494/- (cc=0.4242) info on Rv0494/-
Rv0728c/serA2 (cc=0.4207) info on Rv0728c/serA2
Rv2970A/- (cc=0.4164) info on Rv2970A/-

Correlation of Rv0463/- with Rv0728c/serA2

Normalized LFCs for Rv0463/-:
(description and provenance of datasets)
Rv0463/-Rv0728c/serA2
Fe_supp_jason_reseq

-0.008

0.584

low_pH_jason_reseq

-0.403

-0.744

NO_jason_reseq

-0.677

-0.494

B6_jason_reseq

-1.18

-0.184

MHCII_jason_reseq

-1.029

-0.151

Isoniazid02

0.274

0.068

Rifampicin4

0.246

0.349

Ethambutol3

0.507

0.0

Meropenem3

1.163

1.656

Vancomycin16

0.992

0.822

Rv2680_day32

0.272

-0.252

H37Rv_KO_MarP

0.612

0.246

hypoxia_3wks

-0.666

0.387

hypoxia_6wks

-0.15

0.679

glycerol

-0.413

-0.471

cholesterol

-1.723

-0.371

AJ

-1.213

0.282

Bibs02

0.762

-0.832

Bibs02c

1.006

0.42

BL6

0.576

0.407

BL6a

0.428

0.336

BXD01

0.418

0.242

BXD010

-0.866

0.989

BXD011

0.7

1.865

BXD03

-0.718

0.127

BXD04

0.113

0.472

BXD05

0.048

0.818

BXD06

-0.146

0.666

BXD07

0.137

0.462

BXD08

0.201

0.752

BXD09

0.128

0.624

CAST

-0.022

0.342

CCcont

1.167

-0.076

DS01

-0.2

-0.26

DS02

0.124

-0.969

DS04

-1.698

-0.707

DS0c

-1.103

-0.625

GP01

-1.374

-0.703

GP02

-1.038

-1.195

GP0c

-0.652

-0.776

NOD

-1.077

-0.456

NZO

0.416

0.538

PWK

-0.091

-0.151

H37Rv_KO_CtpC

0.014

0.896

H37Rv_KO_CtpD

-0.982

-1.949

H37Rv_KO_Rv1272

-0.169

0.626

H37Rv_KO_SugABC

-1.953

0.361

H37Rv_KO_MbtN

-0.343

0.712

Trans05

1.108

0.327

macrophage_unactivated

0.565

0.0

IL1

1.026

0.056

Rapamycin

0.654

0.678

Tcell

1.144

0.244

GMCSF

1.141

0.116

IFNab

1.022

0.0

IFNg

1.053

0.361

IFNg_GMCSF1

0.305

0.71

Rv1432_day32

-0.43

1.709

Rv1565c_day32

-0.144

0.392

secA2_input

-0.601

0.044

delta_Rv3594

-1.196

-1.418

delta_Rv3717

-1.763

-0.603

delta_Rv3811

-0.971

-0.931

delta_Rv0954

-0.994

-0.848

PonA1

-1.825

0.07

EccD1_KO

-0.335

0.026

EspI_KO

0.927

0.242

PE35_KO

0.808

-0.166

PPE68_KO

0.064

-0.624

glycerol2

0.977

0.242

lignocerate

0.718

0.407

oleate

0.217

0.047

phosphatidylcholine

0.462

0.113

acetate

0.903

-0.113

glucAc

0.123

0.116

Rv0950ko

1.309

0.078

Rv1096ko

0.214

-0.133

Rv3684ko

-0.449

-0.413

delta_otsA_trehalose

-1.296

-0.68