Top 10 genes with highest correlation to Rv0463/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2833c/ugpB | (cc=0.5193) | info on Rv2833c/ugpB |
| Rv1931c/- | (cc=0.5052) | info on Rv1931c/- |
| Rv2151c/ftsQ | (cc=0.4516) | info on Rv2151c/ftsQ |
| Rv2251/- | (cc=0.4489) | info on Rv2251/- |
| Rv1574/- | (cc=0.4478) | info on Rv1574/- |
| Rv2620c/- | (cc=0.4382) | info on Rv2620c/- |
| Rv0318c/- | (cc=0.4317) | info on Rv0318c/- |
| Rv0494/- | (cc=0.4242) | info on Rv0494/- |
| Rv0728c/serA2 | (cc=0.4207) | info on Rv0728c/serA2 |
| Rv2970A/- | (cc=0.4164) | info on Rv2970A/- |
Correlation of Rv0463/- with Rv2251/-
Normalized LFCs for Rv0463/-:
(description and provenance of datasets)
| Rv0463/- | Rv2251/- | |
| Fe_supp_jason_reseq | -0.008 | -1.446 |
| low_pH_jason_reseq | -0.403 | -0.477 |
| NO_jason_reseq | -0.677 | -0.953 |
| B6_jason_reseq | -1.18 | -0.158 |
| MHCII_jason_reseq | -1.029 | -2.294 |
| Isoniazid02 | 0.274 | 1.542 |
| Rifampicin4 | 0.246 | -0.406 |
| Ethambutol3 | 0.507 | 0.752 |
| Meropenem3 | 1.163 | -0.827 |
| Vancomycin16 | 0.992 | 0.053 |
| Rv2680_day32 | 0.272 | -0.41 |
| H37Rv_KO_MarP | 0.612 | -0.744 |
| hypoxia_3wks | -0.666 | -1.483 |
| hypoxia_6wks | -0.15 | -0.388 |
| glycerol | -0.413 | 0.252 |
| cholesterol | -1.723 | 0.0 |
| AJ | -1.213 | -1.106 |
| Bibs02 | 0.762 | -0.082 |
| Bibs02c | 1.006 | 0.261 |
| BL6 | 0.576 | -0.156 |
| BL6a | 0.428 | -0.606 |
| BXD01 | 0.418 | -0.058 |
| BXD010 | -0.866 | -0.118 |
| BXD011 | 0.7 | 0.192 |
| BXD03 | -0.718 | 0.498 |
| BXD04 | 0.113 | 0.742 |
| BXD05 | 0.048 | -0.522 |
| BXD06 | -0.146 | -0.307 |
| BXD07 | 0.137 | -0.084 |
| BXD08 | 0.201 | 0.039 |
| BXD09 | 0.128 | -0.67 |
| CAST | -0.022 | -0.487 |
| CCcont | 1.167 | 0.64 |
| DS01 | -0.2 | -2.678 |
| DS02 | 0.124 | -0.707 |
| DS04 | -1.698 | 0.365 |
| DS0c | -1.103 | -1.953 |
| GP01 | -1.374 | -2.023 |
| GP02 | -1.038 | -1.546 |
| GP0c | -0.652 | -2.113 |
| NOD | -1.077 | 1.438 |
| NZO | 0.416 | 0.197 |
| PWK | -0.091 | 0.166 |
| H37Rv_KO_CtpC | 0.014 | -0.286 |
| H37Rv_KO_CtpD | -0.982 | -0.76 |
| H37Rv_KO_Rv1272 | -0.169 | -0.431 |
| H37Rv_KO_SugABC | -1.953 | -1.681 |
| H37Rv_KO_MbtN | -0.343 | -0.491 |
| Trans05 | 1.108 | 0.383 |
| macrophage_unactivated | 0.565 | 0.909 |
| IL1 | 1.026 | 1.563 |
| Rapamycin | 0.654 | 2.13 |
| Tcell | 1.144 | 0.583 |
| GMCSF | 1.141 | 2.001 |
| IFNab | 1.022 | 0.187 |
| IFNg | 1.053 | 1.71 |
| IFNg_GMCSF1 | 0.305 | 1.115 |
| Rv1432_day32 | -0.43 | 0.0 |
| Rv1565c_day32 | -0.144 | -1.205 |
| secA2_input | -0.601 | 1.565 |
| delta_Rv3594 | -1.196 | -0.777 |
| delta_Rv3717 | -1.763 | -1.447 |
| delta_Rv3811 | -0.971 | -1.328 |
| delta_Rv0954 | -0.994 | 0.266 |
| PonA1 | -1.825 | -2.608 |
| EccD1_KO | -0.335 | 1.684 |
| EspI_KO | 0.927 | 1.914 |
| PE35_KO | 0.808 | 2.007 |
| PPE68_KO | 0.064 | 1.872 |
| glycerol2 | 0.977 | -1.253 |
| lignocerate | 0.718 | -0.638 |
| oleate | 0.217 | -1.44 |
| phosphatidylcholine | 0.462 | -1.057 |
| acetate | 0.903 | -1.968 |
| glucAc | 0.123 | -0.795 |
| Rv0950ko | 1.309 | 1.478 |
| Rv1096ko | 0.214 | 0.76 |
| Rv3684ko | -0.449 | 1.189 |
| delta_otsA_trehalose | -1.296 | -1.612 |