Top 10 genes with highest correlation to Rv0449c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1104/- | (cc=0.6021) | info on Rv1104/- |
| Rv1758/cut1 | (cc=0.5672) | info on Rv1758/cut1 |
| Rv2028c/- | (cc=0.5615) | info on Rv2028c/- |
| Rv1973/- | (cc=0.5605) | info on Rv1973/- |
| Rv1736c/narX | (cc=0.5559) | info on Rv1736c/narX |
| Rv2458/mmuM | (cc=0.5501) | info on Rv2458/mmuM |
| Rv0139/- | (cc=0.5483) | info on Rv0139/- |
| Rv1992c/ctpG | (cc=0.5394) | info on Rv1992c/ctpG |
| Rv1846c/blaI | (cc=0.5362) | info on Rv1846c/blaI |
| Rv2125/- | (cc=0.5321) | info on Rv2125/- |
Correlation of Rv0449c/- with Rv2028c/-
Normalized LFCs for Rv0449c/-:
(description and provenance of datasets)
| Rv0449c/- | Rv2028c/- | |
| Fe_supp_jason_reseq | -0.355 | -0.545 |
| low_pH_jason_reseq | 0.243 | 0.125 |
| NO_jason_reseq | 0.092 | 0.383 |
| B6_jason_reseq | -0.243 | 1.559 |
| MHCII_jason_reseq | 0.286 | 0.332 |
| Isoniazid02 | 0.01 | 0.201 |
| Rifampicin4 | 0.2 | -0.16 |
| Ethambutol3 | 0.106 | 2.402 |
| Meropenem3 | 0.882 | 0.701 |
| Vancomycin16 | 0.037 | -0.488 |
| Rv2680_day32 | 0.392 | 1.364 |
| H37Rv_KO_MarP | 0.268 | 0.023 |
| hypoxia_3wks | -0.14 | -0.794 |
| hypoxia_6wks | -0.478 | -0.896 |
| glycerol | 0.031 | 0.038 |
| cholesterol | -0.441 | -0.641 |
| AJ | -0.313 | -0.232 |
| Bibs02 | -0.493 | -0.531 |
| Bibs02c | -0.017 | -0.08 |
| BL6 | -0.355 | -1.159 |
| BL6a | -0.319 | -0.575 |
| BXD01 | -1.063 | -2.872 |
| BXD010 | -0.828 | -2.824 |
| BXD011 | -0.3 | -1.303 |
| BXD03 | -0.686 | -1.716 |
| BXD04 | -0.524 | -0.888 |
| BXD05 | -0.532 | -0.984 |
| BXD06 | -0.711 | -1.876 |
| BXD07 | -1.096 | -2.203 |
| BXD08 | -0.602 | -2.416 |
| BXD09 | -1.195 | -1.302 |
| CAST | -0.36 | -0.15 |
| CCcont | -1.146 | -1.338 |
| DS01 | 0.115 | 0.282 |
| DS02 | 0.098 | 0.643 |
| DS04 | 0.03 | -0.025 |
| DS0c | 0.214 | -0.041 |
| GP01 | 0.582 | 0.383 |
| GP02 | 0.674 | -1.4 |
| GP0c | 0.11 | -0.445 |
| NOD | -0.096 | -0.524 |
| NZO | 0.559 | 0.238 |
| PWK | 0.016 | -1.131 |
| H37Rv_KO_CtpC | -0.486 | -1.775 |
| H37Rv_KO_CtpD | -0.48 | -2.301 |
| H37Rv_KO_Rv1272 | -0.172 | -1.731 |
| H37Rv_KO_SugABC | -0.497 | -0.478 |
| H37Rv_KO_MbtN | 0.194 | 0.169 |
| Trans05 | -0.078 | -0.346 |
| macrophage_unactivated | -0.022 | -0.401 |
| IL1 | 0.136 | -1.181 |
| Rapamycin | -0.166 | -0.448 |
| Tcell | -0.906 | -2.108 |
| GMCSF | 0.238 | -0.65 |
| IFNab | 0.139 | -0.327 |
| IFNg | 0.468 | -0.241 |
| IFNg_GMCSF1 | -0.085 | -0.971 |
| Rv1432_day32 | -0.291 | -0.042 |
| Rv1565c_day32 | 0.199 | 0.043 |
| secA2_input | 1.011 | -1.603 |
| delta_Rv3594 | 0.33 | 0.251 |
| delta_Rv3717 | 0.579 | 0.842 |
| delta_Rv3811 | 0.278 | 0.929 |
| delta_Rv0954 | 0.587 | 0.703 |
| PonA1 | 0.748 | 0.208 |
| EccD1_KO | -0.076 | 0.98 |
| EspI_KO | 0.396 | 1.32 |
| PE35_KO | 0.184 | 0.222 |
| PPE68_KO | -0.112 | 0.694 |
| glycerol2 | 0.0 | 0.581 |
| lignocerate | -0.431 | 0.462 |
| oleate | 0.347 | -0.292 |
| phosphatidylcholine | -0.296 | 0.193 |
| acetate | -0.474 | 1.026 |
| glucAc | -0.823 | 0.572 |
| Rv0950ko | 0.624 | 1.544 |
| Rv1096ko | 0.374 | 0.875 |
| Rv3684ko | 0.678 | 0.95 |
| delta_otsA_trehalose | 0.048 | -0.438 |