Top 10 genes with highest correlation to Rv0449c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1104/- | (cc=0.6021) | info on Rv1104/- |
| Rv1758/cut1 | (cc=0.5672) | info on Rv1758/cut1 |
| Rv2028c/- | (cc=0.5615) | info on Rv2028c/- |
| Rv1973/- | (cc=0.5605) | info on Rv1973/- |
| Rv1736c/narX | (cc=0.5559) | info on Rv1736c/narX |
| Rv2458/mmuM | (cc=0.5501) | info on Rv2458/mmuM |
| Rv0139/- | (cc=0.5483) | info on Rv0139/- |
| Rv1992c/ctpG | (cc=0.5394) | info on Rv1992c/ctpG |
| Rv1846c/blaI | (cc=0.5362) | info on Rv1846c/blaI |
| Rv2125/- | (cc=0.5321) | info on Rv2125/- |
Correlation of Rv0449c/- with Rv0139/-
Normalized LFCs for Rv0449c/-:
(description and provenance of datasets)
| Rv0449c/- | Rv0139/- | |
| Fe_supp_jason_reseq | -0.355 | -0.447 |
| low_pH_jason_reseq | 0.243 | 0.032 |
| NO_jason_reseq | 0.092 | 0.21 |
| B6_jason_reseq | -0.243 | 0.667 |
| MHCII_jason_reseq | 0.286 | 0.715 |
| Isoniazid02 | 0.01 | 0.045 |
| Rifampicin4 | 0.2 | -0.536 |
| Ethambutol3 | 0.106 | 2.085 |
| Meropenem3 | 0.882 | 0.017 |
| Vancomycin16 | 0.037 | -0.172 |
| Rv2680_day32 | 0.392 | 1.71 |
| H37Rv_KO_MarP | 0.268 | 0.186 |
| hypoxia_3wks | -0.14 | 0.048 |
| hypoxia_6wks | -0.478 | -0.111 |
| glycerol | 0.031 | 0.26 |
| cholesterol | -0.441 | 0.07 |
| AJ | -0.313 | 0.108 |
| Bibs02 | -0.493 | -0.195 |
| Bibs02c | -0.017 | 0.418 |
| BL6 | -0.355 | -0.668 |
| BL6a | -0.319 | -0.296 |
| BXD01 | -1.063 | -0.691 |
| BXD010 | -0.828 | -0.799 |
| BXD011 | -0.3 | -0.864 |
| BXD03 | -0.686 | -0.533 |
| BXD04 | -0.524 | -0.374 |
| BXD05 | -0.532 | -0.818 |
| BXD06 | -0.711 | -0.588 |
| BXD07 | -1.096 | -0.797 |
| BXD08 | -0.602 | -0.073 |
| BXD09 | -1.195 | -1.175 |
| CAST | -0.36 | 0.305 |
| CCcont | -1.146 | -1.12 |
| DS01 | 0.115 | -0.021 |
| DS02 | 0.098 | -0.348 |
| DS04 | 0.03 | 0.021 |
| DS0c | 0.214 | 0.528 |
| GP01 | 0.582 | 0.27 |
| GP02 | 0.674 | -0.118 |
| GP0c | 0.11 | -0.278 |
| NOD | -0.096 | -0.098 |
| NZO | 0.559 | 0.253 |
| PWK | 0.016 | 0.209 |
| H37Rv_KO_CtpC | -0.486 | -0.715 |
| H37Rv_KO_CtpD | -0.48 | 0.468 |
| H37Rv_KO_Rv1272 | -0.172 | -0.779 |
| H37Rv_KO_SugABC | -0.497 | -1.098 |
| H37Rv_KO_MbtN | 0.194 | -0.293 |
| Trans05 | -0.078 | -0.469 |
| macrophage_unactivated | -0.022 | -0.836 |
| IL1 | 0.136 | -0.581 |
| Rapamycin | -0.166 | -0.414 |
| Tcell | -0.906 | -0.74 |
| GMCSF | 0.238 | -0.158 |
| IFNab | 0.139 | -0.148 |
| IFNg | 0.468 | -0.16 |
| IFNg_GMCSF1 | -0.085 | -0.352 |
| Rv1432_day32 | -0.291 | -0.533 |
| Rv1565c_day32 | 0.199 | -0.058 |
| secA2_input | 1.011 | 0.125 |
| delta_Rv3594 | 0.33 | 0.517 |
| delta_Rv3717 | 0.579 | 0.487 |
| delta_Rv3811 | 0.278 | 0.333 |
| delta_Rv0954 | 0.587 | 0.689 |
| PonA1 | 0.748 | 0.085 |
| EccD1_KO | -0.076 | 0.451 |
| EspI_KO | 0.396 | -0.134 |
| PE35_KO | 0.184 | -0.545 |
| PPE68_KO | -0.112 | -0.275 |
| glycerol2 | 0.0 | 0.224 |
| lignocerate | -0.431 | -0.162 |
| oleate | 0.347 | 0.271 |
| phosphatidylcholine | -0.296 | -0.253 |
| acetate | -0.474 | -0.672 |
| glucAc | -0.823 | -0.609 |
| Rv0950ko | 0.624 | -0.072 |
| Rv1096ko | 0.374 | 0.0 |
| Rv3684ko | 0.678 | 0.282 |
| delta_otsA_trehalose | 0.048 | 0.065 |