Top 10 genes with highest correlation to Rv0425c/ctpH:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0644c/mmaA2 | (cc=0.7169) | info on Rv0644c/mmaA2 |
| Rv1780/- | (cc=0.7118) | info on Rv1780/- |
| Rv0645c/mmaA1 | (cc=0.7049) | info on Rv0645c/mmaA1 |
| Rv3050c/- | (cc=0.6845) | info on Rv3050c/- |
| Rv0502/- | (cc=0.6675) | info on Rv0502/- |
| Rv2185c/TB16.3 | (cc=0.6456) | info on Rv2185c/TB16.3 |
| Rv0642c/mmaA4 | (cc=0.6388) | info on Rv0642c/mmaA4 |
| Rv0473/- | (cc=0.6308) | info on Rv0473/- |
| Rv1925/fadD31 | (cc=0.6203) | info on Rv1925/fadD31 |
| Rv0183/- | (cc=0.6124) | info on Rv0183/- |
Correlation of Rv0425c/ctpH with Rv2185c/TB16.3
Normalized LFCs for Rv0425c/ctpH:
(description and provenance of datasets)
| Rv0425c/ctpH | Rv2185c/TB16.3 | |
| Fe_supp_jason_reseq | -1.718 | -0.701 |
| low_pH_jason_reseq | 1.173 | 0.07 |
| NO_jason_reseq | 0.118 | 3.145 |
| B6_jason_reseq | -0.236 | 0.585 |
| MHCII_jason_reseq | -0.013 | 0.741 |
| Isoniazid02 | -0.111 | 0.0 |
| Rifampicin4 | 0.701 | -0.477 |
| Ethambutol3 | -0.581 | 0.112 |
| Meropenem3 | -0.163 | 0.972 |
| Vancomycin16 | -0.255 | -0.395 |
| Rv2680_day32 | 2.133 | 0.824 |
| H37Rv_KO_MarP | 0.419 | 0.789 |
| hypoxia_3wks | 1.037 | 2.719 |
| hypoxia_6wks | 1.599 | 2.103 |
| glycerol | 0.743 | 0.767 |
| cholesterol | 0.278 | -0.064 |
| AJ | 0.151 | 1.114 |
| Bibs02 | 0.734 | 0.04 |
| Bibs02c | 0.264 | 0.045 |
| BL6 | 0.794 | 2.768 |
| BL6a | 1.347 | 2.642 |
| BXD01 | 1.183 | 3.504 |
| BXD010 | 1.184 | 1.842 |
| BXD011 | 1.811 | 2.894 |
| BXD03 | 0.677 | 2.304 |
| BXD04 | 1.388 | 2.256 |
| BXD05 | 1.185 | 2.403 |
| BXD06 | 1.52 | 2.823 |
| BXD07 | 0.914 | 3.21 |
| BXD08 | 1.311 | 2.579 |
| BXD09 | 1.391 | 3.357 |
| CAST | -0.357 | -0.439 |
| CCcont | 0.251 | 1.992 |
| DS01 | 0.491 | 0.631 |
| DS02 | 0.726 | 0.047 |
| DS04 | 0.675 | 0.676 |
| DS0c | 0.486 | 1.215 |
| GP01 | 1.245 | 0.883 |
| GP02 | 1.46 | 1.052 |
| GP0c | 0.667 | 1.959 |
| NOD | -0.226 | -0.88 |
| NZO | 0.552 | -0.134 |
| PWK | -0.097 | 0.163 |
| H37Rv_KO_CtpC | 0.178 | -0.856 |
| H37Rv_KO_CtpD | -1.43 | 0.818 |
| H37Rv_KO_Rv1272 | 1.055 | 2.161 |
| H37Rv_KO_SugABC | 0.736 | -0.357 |
| H37Rv_KO_MbtN | 1.73 | 1.098 |
| Trans05 | 2.05 | 1.263 |
| macrophage_unactivated | -0.41 | 0.761 |
| IL1 | 0.997 | -0.86 |
| Rapamycin | 0.755 | -0.206 |
| Tcell | 2.108 | 1.3 |
| GMCSF | 0.119 | -0.626 |
| IFNab | -0.502 | 0.671 |
| IFNg | 0.254 | -0.567 |
| IFNg_GMCSF1 | 0.041 | 0.135 |
| Rv1432_day32 | 3.046 | 2.759 |
| Rv1565c_day32 | -0.291 | -0.335 |
| secA2_input | 0.326 | 0.092 |
| delta_Rv3594 | -0.081 | 0.884 |
| delta_Rv3717 | 2.065 | 1.24 |
| delta_Rv3811 | 0.813 | 0.741 |
| delta_Rv0954 | -1.301 | -0.658 |
| PonA1 | -0.862 | -1.11 |
| EccD1_KO | -1.812 | -2.273 |
| EspI_KO | -2.139 | -1.526 |
| PE35_KO | -1.779 | -0.309 |
| PPE68_KO | -1.718 | -0.8 |
| glycerol2 | 0.27 | 2.172 |
| lignocerate | 0.726 | 0.082 |
| oleate | -0.403 | -0.373 |
| phosphatidylcholine | 0.249 | 0.183 |
| acetate | 0.733 | 1.485 |
| glucAc | 0.628 | 1.409 |
| Rv0950ko | -0.826 | -1.423 |
| Rv1096ko | -0.591 | -0.814 |
| Rv3684ko | -0.085 | -1.019 |
| delta_otsA_trehalose | -0.203 | -0.363 |