Top 10 genes with highest correlation to Rv0425c/ctpH:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0644c/mmaA2 | (cc=0.7169) | info on Rv0644c/mmaA2 |
| Rv1780/- | (cc=0.7118) | info on Rv1780/- |
| Rv0645c/mmaA1 | (cc=0.7049) | info on Rv0645c/mmaA1 |
| Rv3050c/- | (cc=0.6845) | info on Rv3050c/- |
| Rv0502/- | (cc=0.6675) | info on Rv0502/- |
| Rv2185c/TB16.3 | (cc=0.6456) | info on Rv2185c/TB16.3 |
| Rv0642c/mmaA4 | (cc=0.6388) | info on Rv0642c/mmaA4 |
| Rv0473/- | (cc=0.6308) | info on Rv0473/- |
| Rv1925/fadD31 | (cc=0.6203) | info on Rv1925/fadD31 |
| Rv0183/- | (cc=0.6124) | info on Rv0183/- |
Correlation of Rv0425c/ctpH with Rv1780/-
Normalized LFCs for Rv0425c/ctpH:
(description and provenance of datasets)
| Rv0425c/ctpH | Rv1780/- | |
| Fe_supp_jason_reseq | -1.718 | -1.778 |
| low_pH_jason_reseq | 1.173 | -0.34 |
| NO_jason_reseq | 0.118 | -2.084 |
| B6_jason_reseq | -0.236 | -3.549 |
| MHCII_jason_reseq | -0.013 | -0.977 |
| Isoniazid02 | -0.111 | 2.506 |
| Rifampicin4 | 0.701 | -0.639 |
| Ethambutol3 | -0.581 | 1.978 |
| Meropenem3 | -0.163 | 0.727 |
| Vancomycin16 | -0.255 | -0.491 |
| Rv2680_day32 | 2.133 | 1.835 |
| H37Rv_KO_MarP | 0.419 | -0.267 |
| hypoxia_3wks | 1.037 | 1.288 |
| hypoxia_6wks | 1.599 | 3.454 |
| glycerol | 0.743 | 2.188 |
| cholesterol | 0.278 | 2.714 |
| AJ | 0.151 | -0.768 |
| Bibs02 | 0.734 | 1.197 |
| Bibs02c | 0.264 | 1.17 |
| BL6 | 0.794 | 1.216 |
| BL6a | 1.347 | 1.807 |
| BXD01 | 1.183 | 2.028 |
| BXD010 | 1.184 | 1.29 |
| BXD011 | 1.811 | 3.362 |
| BXD03 | 0.677 | 1.659 |
| BXD04 | 1.388 | 2.619 |
| BXD05 | 1.185 | 1.815 |
| BXD06 | 1.52 | 3.056 |
| BXD07 | 0.914 | 1.865 |
| BXD08 | 1.311 | 1.959 |
| BXD09 | 1.391 | 2.253 |
| CAST | -0.357 | -1.922 |
| CCcont | 0.251 | 0.954 |
| DS01 | 0.491 | 0.435 |
| DS02 | 0.726 | -1.03 |
| DS04 | 0.675 | 0.232 |
| DS0c | 0.486 | 0.74 |
| GP01 | 1.245 | 2.552 |
| GP02 | 1.46 | 2.909 |
| GP0c | 0.667 | 2.635 |
| NOD | -0.226 | -1.01 |
| NZO | 0.552 | -0.123 |
| PWK | -0.097 | -1.451 |
| H37Rv_KO_CtpC | 0.178 | 1.377 |
| H37Rv_KO_CtpD | -1.43 | -0.826 |
| H37Rv_KO_Rv1272 | 1.055 | 1.908 |
| H37Rv_KO_SugABC | 0.736 | 2.077 |
| H37Rv_KO_MbtN | 1.73 | 3.96 |
| Trans05 | 2.05 | 2.432 |
| macrophage_unactivated | -0.41 | -0.189 |
| IL1 | 0.997 | -1.264 |
| Rapamycin | 0.755 | -0.85 |
| Tcell | 2.108 | 2.444 |
| GMCSF | 0.119 | -1.009 |
| IFNab | -0.502 | 0.641 |
| IFNg | 0.254 | -1.732 |
| IFNg_GMCSF1 | 0.041 | -3.126 |
| Rv1432_day32 | 3.046 | 2.211 |
| Rv1565c_day32 | -0.291 | 1.35 |
| secA2_input | 0.326 | -1.45 |
| delta_Rv3594 | -0.081 | 1.334 |
| delta_Rv3717 | 2.065 | 2.956 |
| delta_Rv3811 | 0.813 | 1.866 |
| delta_Rv0954 | -1.301 | -1.335 |
| PonA1 | -0.862 | -2.652 |
| EccD1_KO | -1.812 | -2.993 |
| EspI_KO | -2.139 | -2.21 |
| PE35_KO | -1.779 | -2.634 |
| PPE68_KO | -1.718 | -2.102 |
| glycerol2 | 0.27 | 0.483 |
| lignocerate | 0.726 | 0.36 |
| oleate | -0.403 | 0.034 |
| phosphatidylcholine | 0.249 | 0.653 |
| acetate | 0.733 | -0.374 |
| glucAc | 0.628 | -0.518 |
| Rv0950ko | -0.826 | -2.783 |
| Rv1096ko | -0.591 | -3.685 |
| Rv3684ko | -0.085 | -2.731 |
| delta_otsA_trehalose | -0.203 | -1.034 |