Top 10 genes with highest correlation to Rv0392c/ndhA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3455c/truA | (cc=0.708) | info on Rv3455c/truA |
| Rv3262/fbiB | (cc=0.6922) | info on Rv3262/fbiB |
| Rv3624c/hpt | (cc=0.6772) | info on Rv3624c/hpt |
| Rv3261/fbiA | (cc=0.6611) | info on Rv3261/fbiA |
| Rv2909c/rpsP | (cc=0.656) | info on Rv2909c/rpsP |
| Rv1173/fbiC | (cc=0.6551) | info on Rv1173/fbiC |
| Rv2894c/xerC | (cc=0.6411) | info on Rv2894c/xerC |
| Rv0526/- | (cc=0.6192) | info on Rv0526/- |
| Rv3193c/- | (cc=0.602) | info on Rv3193c/- |
| Rv2973c/recG | (cc=0.5969) | info on Rv2973c/recG |
Correlation of Rv0392c/ndhA with Rv2973c/recG
Normalized LFCs for Rv0392c/ndhA:
(description and provenance of datasets)
| Rv0392c/ndhA | Rv2973c/recG | |
| Fe_supp_jason_reseq | 1.659 | 1.077 |
| low_pH_jason_reseq | 1.541 | -0.156 |
| NO_jason_reseq | -0.914 | 0.155 |
| B6_jason_reseq | -1.228 | 1.006 |
| MHCII_jason_reseq | 0.9 | 0.427 |
| Isoniazid02 | 0.3 | -0.031 |
| Rifampicin4 | 0.75 | 0.165 |
| Ethambutol3 | 1.085 | 0.536 |
| Meropenem3 | 0.438 | 0.253 |
| Vancomycin16 | 0.385 | -0.284 |
| Rv2680_day32 | 0.0 | 0.228 |
| H37Rv_KO_MarP | -0.326 | -0.285 |
| hypoxia_3wks | -0.475 | -0.443 |
| hypoxia_6wks | -1.261 | -0.549 |
| glycerol | 1.336 | 0.642 |
| cholesterol | 1.485 | 0.852 |
| AJ | 0.637 | -0.225 |
| Bibs02 | 1.14 | 0.201 |
| Bibs02c | 1.005 | 0.555 |
| BL6 | -1.093 | 0.702 |
| BL6a | -0.106 | 0.63 |
| BXD01 | 0.322 | 0.248 |
| BXD010 | -0.385 | 0.429 |
| BXD011 | -0.412 | 0.315 |
| BXD03 | -0.98 | 0.604 |
| BXD04 | -0.772 | 0.136 |
| BXD05 | -0.68 | 0.283 |
| BXD06 | -0.531 | 0.202 |
| BXD07 | -0.517 | 0.317 |
| BXD08 | -0.918 | 0.353 |
| BXD09 | -0.155 | 0.494 |
| CAST | -0.976 | -0.407 |
| CCcont | 0.306 | 1.099 |
| DS01 | 1.627 | 1.194 |
| DS02 | 0.871 | 1.601 |
| DS04 | 0.453 | 0.838 |
| DS0c | 1.571 | 0.69 |
| GP01 | -0.617 | -1.067 |
| GP02 | 0.624 | 0.092 |
| GP0c | -0.169 | -0.507 |
| NOD | -0.381 | 0.384 |
| NZO | -0.071 | 0.178 |
| PWK | -1.637 | 0.216 |
| H37Rv_KO_CtpC | -0.606 | -0.475 |
| H37Rv_KO_CtpD | 1.15 | 0.192 |
| H37Rv_KO_Rv1272 | 0.072 | 0.811 |
| H37Rv_KO_SugABC | 0.465 | 0.729 |
| H37Rv_KO_MbtN | 1.096 | -0.075 |
| Trans05 | -0.393 | 0.584 |
| macrophage_unactivated | 0.672 | -0.092 |
| IL1 | -0.629 | -0.848 |
| Rapamycin | -0.534 | -0.773 |
| Tcell | -0.332 | -0.71 |
| GMCSF | -0.766 | 0.0 |
| IFNab | 0.381 | 0.493 |
| IFNg | -1.478 | 0.639 |
| IFNg_GMCSF1 | -1.037 | -0.28 |
| Rv1432_day32 | 2.654 | 0.621 |
| Rv1565c_day32 | 1.27 | -0.142 |
| secA2_input | -0.086 | -0.276 |
| delta_Rv3594 | 0.613 | 0.106 |
| delta_Rv3717 | 0.14 | -0.045 |
| delta_Rv3811 | 0.955 | 0.338 |
| delta_Rv0954 | 1.255 | -0.678 |
| PonA1 | 1.138 | 0.155 |
| EccD1_KO | -0.849 | -0.753 |
| EspI_KO | -1.161 | 0.416 |
| PE35_KO | -0.592 | 0.111 |
| PPE68_KO | -0.691 | 0.522 |
| glycerol2 | -4.603 | -1.595 |
| lignocerate | -4.0 | -1.218 |
| oleate | -4.657 | -1.613 |
| phosphatidylcholine | -4.969 | -1.401 |
| acetate | -0.55 | -0.229 |
| glucAc | -0.664 | 0.392 |
| Rv0950ko | 1.511 | 0.154 |
| Rv1096ko | 1.559 | 0.76 |
| Rv3684ko | 1.379 | 0.632 |
| delta_otsA_trehalose | 0.0 | 0.408 |