Top 10 genes with highest correlation to Rv0392c/ndhA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3455c/truA | (cc=0.708) | info on Rv3455c/truA |
| Rv3262/fbiB | (cc=0.6922) | info on Rv3262/fbiB |
| Rv3624c/hpt | (cc=0.6772) | info on Rv3624c/hpt |
| Rv3261/fbiA | (cc=0.6611) | info on Rv3261/fbiA |
| Rv2909c/rpsP | (cc=0.656) | info on Rv2909c/rpsP |
| Rv1173/fbiC | (cc=0.6551) | info on Rv1173/fbiC |
| Rv2894c/xerC | (cc=0.6411) | info on Rv2894c/xerC |
| Rv0526/- | (cc=0.6192) | info on Rv0526/- |
| Rv3193c/- | (cc=0.602) | info on Rv3193c/- |
| Rv2973c/recG | (cc=0.5969) | info on Rv2973c/recG |
Correlation of Rv0392c/ndhA with Rv2894c/xerC
Normalized LFCs for Rv0392c/ndhA:
(description and provenance of datasets)
| Rv0392c/ndhA | Rv2894c/xerC | |
| Fe_supp_jason_reseq | 1.659 | 1.883 |
| low_pH_jason_reseq | 1.541 | 1.586 |
| NO_jason_reseq | -0.914 | 0.263 |
| B6_jason_reseq | -1.228 | -0.119 |
| MHCII_jason_reseq | 0.9 | -0.34 |
| Isoniazid02 | 0.3 | 0.851 |
| Rifampicin4 | 0.75 | 1.124 |
| Ethambutol3 | 1.085 | 0.22 |
| Meropenem3 | 0.438 | 0.217 |
| Vancomycin16 | 0.385 | 0.0 |
| Rv2680_day32 | 0.0 | -0.518 |
| H37Rv_KO_MarP | -0.326 | 0.0 |
| hypoxia_3wks | -0.475 | -0.77 |
| hypoxia_6wks | -1.261 | -0.403 |
| glycerol | 1.336 | 1.365 |
| cholesterol | 1.485 | 0.979 |
| AJ | 0.637 | -0.232 |
| Bibs02 | 1.14 | 0.167 |
| Bibs02c | 1.005 | 0.527 |
| BL6 | -1.093 | 0.964 |
| BL6a | -0.106 | 0.346 |
| BXD01 | 0.322 | 0.227 |
| BXD010 | -0.385 | 0.117 |
| BXD011 | -0.412 | 0.982 |
| BXD03 | -0.98 | 0.615 |
| BXD04 | -0.772 | 0.0 |
| BXD05 | -0.68 | 0.612 |
| BXD06 | -0.531 | 0.122 |
| BXD07 | -0.517 | 0.712 |
| BXD08 | -0.918 | 0.335 |
| BXD09 | -0.155 | 0.245 |
| CAST | -0.976 | -0.23 |
| CCcont | 0.306 | 1.565 |
| DS01 | 1.627 | 0.595 |
| DS02 | 0.871 | 0.548 |
| DS04 | 0.453 | -0.194 |
| DS0c | 1.571 | -0.217 |
| GP01 | -0.617 | -0.099 |
| GP02 | 0.624 | -0.083 |
| GP0c | -0.169 | -0.13 |
| NOD | -0.381 | -0.225 |
| NZO | -0.071 | -0.199 |
| PWK | -1.637 | 0.0 |
| H37Rv_KO_CtpC | -0.606 | 0.526 |
| H37Rv_KO_CtpD | 1.15 | 0.723 |
| H37Rv_KO_Rv1272 | 0.072 | 0.129 |
| H37Rv_KO_SugABC | 0.465 | -0.099 |
| H37Rv_KO_MbtN | 1.096 | 0.26 |
| Trans05 | -0.393 | 1.007 |
| macrophage_unactivated | 0.672 | 0.0 |
| IL1 | -0.629 | -0.317 |
| Rapamycin | -0.534 | 0.0 |
| Tcell | -0.332 | 0.326 |
| GMCSF | -0.766 | -0.283 |
| IFNab | 0.381 | 0.583 |
| IFNg | -1.478 | 0.267 |
| IFNg_GMCSF1 | -1.037 | 0.88 |
| Rv1432_day32 | 2.654 | -0.648 |
| Rv1565c_day32 | 1.27 | -0.158 |
| secA2_input | -0.086 | -0.695 |
| delta_Rv3594 | 0.613 | 1.337 |
| delta_Rv3717 | 0.14 | -0.159 |
| delta_Rv3811 | 0.955 | 1.396 |
| delta_Rv0954 | 1.255 | 1.331 |
| PonA1 | 1.138 | 0.892 |
| EccD1_KO | -0.849 | 0.526 |
| EspI_KO | -1.161 | -0.799 |
| PE35_KO | -0.592 | 0.788 |
| PPE68_KO | -0.691 | -0.278 |
| glycerol2 | -4.603 | -2.106 |
| lignocerate | -4.0 | -1.83 |
| oleate | -4.657 | -1.815 |
| phosphatidylcholine | -4.969 | -2.105 |
| acetate | -0.55 | -0.554 |
| glucAc | -0.664 | 0.35 |
| Rv0950ko | 1.511 | 0.998 |
| Rv1096ko | 1.559 | 1.716 |
| Rv3684ko | 1.379 | 0.707 |
| delta_otsA_trehalose | 0.0 | -1.026 |