Top 10 genes with highest correlation to Rv0377/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1638A/- | (cc=0.6094) | info on Rv1638A/- |
| Rv1291c/- | (cc=0.597) | info on Rv1291c/- |
| Rv3078/hab | (cc=0.5644) | info on Rv3078/hab |
| Rv0848/cysK2 | (cc=0.5584) | info on Rv0848/cysK2 |
| Rv2831/echA16 | (cc=0.5527) | info on Rv2831/echA16 |
| Rv0889c/citA | (cc=0.551) | info on Rv0889c/citA |
| Rv2725c/hflX | (cc=0.5417) | info on Rv2725c/hflX |
| Rv0914c/- | (cc=0.5359) | info on Rv0914c/- |
| Rv1287/- | (cc=0.5356) | info on Rv1287/- |
| Rv0039c/- | (cc=0.5349) | info on Rv0039c/- |
Correlation of Rv0377/- with Rv2831/echA16
Normalized LFCs for Rv0377/-:
(description and provenance of datasets)
| Rv0377/- | Rv2831/echA16 | |
| Fe_supp_jason_reseq | -0.655 | -0.256 |
| low_pH_jason_reseq | -0.893 | 0.639 |
| NO_jason_reseq | 1.189 | -0.116 |
| B6_jason_reseq | 0.636 | 1.588 |
| MHCII_jason_reseq | 0.217 | 1.883 |
| Isoniazid02 | 0.451 | 2.51 |
| Rifampicin4 | 0.368 | 0.601 |
| Ethambutol3 | 0.396 | 2.881 |
| Meropenem3 | 0.503 | 0.048 |
| Vancomycin16 | 0.26 | 0.499 |
| Rv2680_day32 | -0.642 | -3.534 |
| H37Rv_KO_MarP | 0.746 | -0.086 |
| hypoxia_3wks | -0.694 | 0.861 |
| hypoxia_6wks | -0.821 | 0.489 |
| glycerol | -1.173 | 0.205 |
| cholesterol | 0.323 | 1.595 |
| AJ | 0.148 | 0.145 |
| Bibs02 | 1.06 | 0.54 |
| Bibs02c | 0.441 | -0.527 |
| BL6 | -1.4 | -1.548 |
| BL6a | -0.346 | -0.756 |
| BXD01 | -1.205 | -1.326 |
| BXD010 | -0.352 | -1.676 |
| BXD011 | -1.696 | 0.027 |
| BXD03 | -1.01 | -1.77 |
| BXD04 | -0.584 | -1.259 |
| BXD05 | -0.258 | -0.812 |
| BXD06 | -1.058 | -1.436 |
| BXD07 | -1.844 | -0.809 |
| BXD08 | -1.162 | -0.549 |
| BXD09 | -0.713 | -1.143 |
| CAST | -0.766 | -1.39 |
| CCcont | -2.602 | -1.479 |
| DS01 | 0.541 | 0.541 |
| DS02 | -0.098 | 0.859 |
| DS04 | 0.649 | 1.427 |
| DS0c | 0.859 | 0.046 |
| GP01 | -1.265 | 0.531 |
| GP02 | -2.155 | -1.576 |
| GP0c | -2.122 | -0.381 |
| NOD | -0.205 | -0.724 |
| NZO | -1.29 | -1.623 |
| PWK | -0.342 | 0.432 |
| H37Rv_KO_CtpC | -1.392 | -1.522 |
| H37Rv_KO_CtpD | -1.364 | 0.573 |
| H37Rv_KO_Rv1272 | -1.256 | -0.773 |
| H37Rv_KO_SugABC | 0.456 | -1.335 |
| H37Rv_KO_MbtN | -1.836 | -1.826 |
| Trans05 | -2.179 | -2.563 |
| macrophage_unactivated | -0.36 | -0.347 |
| IL1 | 0.789 | 1.385 |
| Rapamycin | -1.522 | 0.064 |
| Tcell | -0.635 | 0.821 |
| GMCSF | -0.459 | -0.055 |
| IFNab | -0.112 | 0.653 |
| IFNg | -0.358 | 0.673 |
| IFNg_GMCSF1 | 0.883 | 0.503 |
| Rv1432_day32 | 0.0 | -0.322 |
| Rv1565c_day32 | 2.132 | 0.924 |
| secA2_input | -0.861 | 0.0 |
| delta_Rv3594 | 1.456 | 1.825 |
| delta_Rv3717 | 0.452 | 1.538 |
| delta_Rv3811 | 1.533 | 2.066 |
| delta_Rv0954 | 1.591 | 2.374 |
| PonA1 | 1.08 | 3.382 |
| EccD1_KO | -0.171 | -1.184 |
| EspI_KO | 2.387 | -0.054 |
| PE35_KO | 1.552 | 0.055 |
| PPE68_KO | 0.688 | -1.389 |
| glycerol2 | -2.626 | -1.345 |
| lignocerate | -1.671 | -1.729 |
| oleate | -0.784 | -0.519 |
| phosphatidylcholine | -1.863 | -1.62 |
| acetate | -1.662 | -2.613 |
| glucAc | -2.542 | -1.71 |
| Rv0950ko | 1.517 | -1.152 |
| Rv1096ko | 0.971 | 0.232 |
| Rv3684ko | 1.055 | -0.848 |
| delta_otsA_trehalose | 1.917 | -0.106 |