Top 10 genes with highest correlation to Rv0377/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1638A/- | (cc=0.6094) | info on Rv1638A/- |
| Rv1291c/- | (cc=0.597) | info on Rv1291c/- |
| Rv3078/hab | (cc=0.5644) | info on Rv3078/hab |
| Rv0848/cysK2 | (cc=0.5584) | info on Rv0848/cysK2 |
| Rv2831/echA16 | (cc=0.5527) | info on Rv2831/echA16 |
| Rv0889c/citA | (cc=0.551) | info on Rv0889c/citA |
| Rv2725c/hflX | (cc=0.5417) | info on Rv2725c/hflX |
| Rv0914c/- | (cc=0.5359) | info on Rv0914c/- |
| Rv1287/- | (cc=0.5356) | info on Rv1287/- |
| Rv0039c/- | (cc=0.5349) | info on Rv0039c/- |
Correlation of Rv0377/- with Rv0848/cysK2
Normalized LFCs for Rv0377/-:
(description and provenance of datasets)
| Rv0377/- | Rv0848/cysK2 | |
| Fe_supp_jason_reseq | -0.655 | 0.221 |
| low_pH_jason_reseq | -0.893 | -0.214 |
| NO_jason_reseq | 1.189 | 1.152 |
| B6_jason_reseq | 0.636 | 1.176 |
| MHCII_jason_reseq | 0.217 | 0.917 |
| Isoniazid02 | 0.451 | 0.469 |
| Rifampicin4 | 0.368 | 0.46 |
| Ethambutol3 | 0.396 | 2.419 |
| Meropenem3 | 0.503 | 0.053 |
| Vancomycin16 | 0.26 | 0.708 |
| Rv2680_day32 | -0.642 | 1.311 |
| H37Rv_KO_MarP | 0.746 | 0.772 |
| hypoxia_3wks | -0.694 | 0.694 |
| hypoxia_6wks | -0.821 | 0.768 |
| glycerol | -1.173 | -0.494 |
| cholesterol | 0.323 | -0.242 |
| AJ | 0.148 | -0.568 |
| Bibs02 | 1.06 | 0.989 |
| Bibs02c | 0.441 | -0.097 |
| BL6 | -1.4 | -0.35 |
| BL6a | -0.346 | -0.462 |
| BXD01 | -1.205 | -0.349 |
| BXD010 | -0.352 | -0.555 |
| BXD011 | -1.696 | -0.958 |
| BXD03 | -1.01 | -0.92 |
| BXD04 | -0.584 | -0.303 |
| BXD05 | -0.258 | -0.314 |
| BXD06 | -1.058 | -0.238 |
| BXD07 | -1.844 | 0.315 |
| BXD08 | -1.162 | -0.153 |
| BXD09 | -0.713 | -0.772 |
| CAST | -0.766 | -0.511 |
| CCcont | -2.602 | -0.688 |
| DS01 | 0.541 | 0.104 |
| DS02 | -0.098 | 0.208 |
| DS04 | 0.649 | 0.233 |
| DS0c | 0.859 | -0.121 |
| GP01 | -1.265 | -1.039 |
| GP02 | -2.155 | -1.521 |
| GP0c | -2.122 | -1.053 |
| NOD | -0.205 | -1.489 |
| NZO | -1.29 | -0.558 |
| PWK | -0.342 | 0.087 |
| H37Rv_KO_CtpC | -1.392 | -0.638 |
| H37Rv_KO_CtpD | -1.364 | -0.775 |
| H37Rv_KO_Rv1272 | -1.256 | -1.009 |
| H37Rv_KO_SugABC | 0.456 | -1.068 |
| H37Rv_KO_MbtN | -1.836 | -0.351 |
| Trans05 | -2.179 | -1.408 |
| macrophage_unactivated | -0.36 | -0.193 |
| IL1 | 0.789 | 0.116 |
| Rapamycin | -1.522 | 0.12 |
| Tcell | -0.635 | -0.13 |
| GMCSF | -0.459 | 0.203 |
| IFNab | -0.112 | -0.06 |
| IFNg | -0.358 | -0.163 |
| IFNg_GMCSF1 | 0.883 | 0.949 |
| Rv1432_day32 | 0.0 | -0.398 |
| Rv1565c_day32 | 2.132 | -0.449 |
| secA2_input | -0.861 | 0.326 |
| delta_Rv3594 | 1.456 | 1.106 |
| delta_Rv3717 | 0.452 | 0.2 |
| delta_Rv3811 | 1.533 | 0.449 |
| delta_Rv0954 | 1.591 | 1.99 |
| PonA1 | 1.08 | 0.38 |
| EccD1_KO | -0.171 | 0.072 |
| EspI_KO | 2.387 | 0.248 |
| PE35_KO | 1.552 | -0.134 |
| PPE68_KO | 0.688 | 0.0 |
| glycerol2 | -2.626 | -0.577 |
| lignocerate | -1.671 | -0.799 |
| oleate | -0.784 | -0.24 |
| phosphatidylcholine | -1.863 | -0.522 |
| acetate | -1.662 | -1.039 |
| glucAc | -2.542 | -1.065 |
| Rv0950ko | 1.517 | -0.829 |
| Rv1096ko | 0.971 | 0.546 |
| Rv3684ko | 1.055 | -0.193 |
| delta_otsA_trehalose | 1.917 | 1.139 |