Top 10 genes with highest correlation to Rv0377/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1638A/- | (cc=0.6094) | info on Rv1638A/- |
| Rv1291c/- | (cc=0.597) | info on Rv1291c/- |
| Rv3078/hab | (cc=0.5644) | info on Rv3078/hab |
| Rv0848/cysK2 | (cc=0.5584) | info on Rv0848/cysK2 |
| Rv2831/echA16 | (cc=0.5527) | info on Rv2831/echA16 |
| Rv0889c/citA | (cc=0.551) | info on Rv0889c/citA |
| Rv2725c/hflX | (cc=0.5417) | info on Rv2725c/hflX |
| Rv0914c/- | (cc=0.5359) | info on Rv0914c/- |
| Rv1287/- | (cc=0.5356) | info on Rv1287/- |
| Rv0039c/- | (cc=0.5349) | info on Rv0039c/- |
Correlation of Rv0377/- with Rv0914c/-
Normalized LFCs for Rv0377/-:
(description and provenance of datasets)
| Rv0377/- | Rv0914c/- | |
| Fe_supp_jason_reseq | -0.655 | 0.264 |
| low_pH_jason_reseq | -0.893 | 0.53 |
| NO_jason_reseq | 1.189 | 0.289 |
| B6_jason_reseq | 0.636 | 0.9 |
| MHCII_jason_reseq | 0.217 | 1.272 |
| Isoniazid02 | 0.451 | -0.453 |
| Rifampicin4 | 0.368 | 0.157 |
| Ethambutol3 | 0.396 | -0.378 |
| Meropenem3 | 0.503 | 0.2 |
| Vancomycin16 | 0.26 | 0.478 |
| Rv2680_day32 | -0.642 | -1.695 |
| H37Rv_KO_MarP | 0.746 | 0.509 |
| hypoxia_3wks | -0.694 | 0.319 |
| hypoxia_6wks | -0.821 | -0.065 |
| glycerol | -1.173 | -0.913 |
| cholesterol | 0.323 | -0.512 |
| AJ | 0.148 | 0.089 |
| Bibs02 | 1.06 | -0.827 |
| Bibs02c | 0.441 | -0.594 |
| BL6 | -1.4 | -1.486 |
| BL6a | -0.346 | -1.083 |
| BXD01 | -1.205 | -1.172 |
| BXD010 | -0.352 | -0.826 |
| BXD011 | -1.696 | -1.499 |
| BXD03 | -1.01 | -1.526 |
| BXD04 | -0.584 | -1.597 |
| BXD05 | -0.258 | -0.898 |
| BXD06 | -1.058 | -1.799 |
| BXD07 | -1.844 | -1.234 |
| BXD08 | -1.162 | -0.887 |
| BXD09 | -0.713 | -1.291 |
| CAST | -0.766 | 0.315 |
| CCcont | -2.602 | -1.536 |
| DS01 | 0.541 | 0.811 |
| DS02 | -0.098 | 0.625 |
| DS04 | 0.649 | 0.682 |
| DS0c | 0.859 | 0.108 |
| GP01 | -1.265 | -0.3 |
| GP02 | -2.155 | -1.785 |
| GP0c | -2.122 | -0.838 |
| NOD | -0.205 | 0.291 |
| NZO | -1.29 | -0.097 |
| PWK | -0.342 | 0.091 |
| H37Rv_KO_CtpC | -1.392 | -0.724 |
| H37Rv_KO_CtpD | -1.364 | -2.503 |
| H37Rv_KO_Rv1272 | -1.256 | -0.961 |
| H37Rv_KO_SugABC | 0.456 | -0.286 |
| H37Rv_KO_MbtN | -1.836 | -1.36 |
| Trans05 | -2.179 | 0.021 |
| macrophage_unactivated | -0.36 | -0.556 |
| IL1 | 0.789 | -0.329 |
| Rapamycin | -1.522 | -0.58 |
| Tcell | -0.635 | -1.03 |
| GMCSF | -0.459 | -0.993 |
| IFNab | -0.112 | -1.091 |
| IFNg | -0.358 | -0.73 |
| IFNg_GMCSF1 | 0.883 | 0.182 |
| Rv1432_day32 | 0.0 | 0.242 |
| Rv1565c_day32 | 2.132 | 0.899 |
| secA2_input | -0.861 | 0.485 |
| delta_Rv3594 | 1.456 | 0.528 |
| delta_Rv3717 | 0.452 | 0.064 |
| delta_Rv3811 | 1.533 | 0.238 |
| delta_Rv0954 | 1.591 | 0.393 |
| PonA1 | 1.08 | 0.65 |
| EccD1_KO | -0.171 | 0.273 |
| EspI_KO | 2.387 | 0.399 |
| PE35_KO | 1.552 | -0.219 |
| PPE68_KO | 0.688 | 0.038 |
| glycerol2 | -2.626 | -0.371 |
| lignocerate | -1.671 | 0.089 |
| oleate | -0.784 | -0.647 |
| phosphatidylcholine | -1.863 | -0.434 |
| acetate | -1.662 | -0.047 |
| glucAc | -2.542 | 0.582 |
| Rv0950ko | 1.517 | 0.522 |
| Rv1096ko | 0.971 | 0.814 |
| Rv3684ko | 1.055 | 1.497 |
| delta_otsA_trehalose | 1.917 | 0.0 |