Top 10 genes with highest correlation to Rv0370c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv0827c/kmtR | (cc=0.5373) | info on Rv0827c/kmtR |
Rv3291c/lrpA | (cc=0.5162) | info on Rv3291c/lrpA |
Rv1891/- | (cc=0.4653) | info on Rv1891/- |
Rv0845/- | (cc=0.4497) | info on Rv0845/- |
Rv1397c/vapC10 | (cc=0.4465) | info on Rv1397c/vapC10 |
Rv1662/pks8 | (cc=0.4362) | info on Rv1662/pks8 |
Rv1507c/- | (cc=0.4336) | info on Rv1507c/- |
Rv2793c/truB | (cc=0.4206) | info on Rv2793c/truB |
Rv3904c/esxE | (cc=0.4159) | info on Rv3904c/esxE |
Rv3023c/- | (cc=0.4149) | info on Rv3023c/- |
Correlation of Rv0370c/- with Rv1397c/vapC10
Normalized LFCs for Rv0370c/-:
(description and provenance of datasets)
Rv0370c/- | Rv1397c/vapC10 | |
Fe_supp_jason_reseq | -0.553 | 0.586 |
low_pH_jason_reseq | 1.696 | 2.312 |
NO_jason_reseq | 0.42 | -1.26 |
B6_jason_reseq | -0.388 | -0.488 |
MHCII_jason_reseq | -1.006 | 0.427 |
Isoniazid02 | -0.741 | 0.598 |
Rifampicin4 | 0.72 | 0.558 |
Ethambutol3 | -0.912 | 0.585 |
Meropenem3 | -0.072 | 1.412 |
Vancomycin16 | 0.101 | 0.655 |
Rv2680_day32 | -0.893 | -0.628 |
H37Rv_KO_MarP | -0.416 | 0.111 |
hypoxia_3wks | 0.0 | -0.379 |
hypoxia_6wks | 0.372 | -0.157 |
glycerol | 0.471 | -0.784 |
cholesterol | -0.098 | -0.681 |
AJ | 1.4 | 0.898 |
Bibs02 | 0.608 | -0.759 |
Bibs02c | -0.54 | 0.074 |
BL6 | 0.117 | 0.813 |
BL6a | 1.195 | 1.702 |
BXD01 | 0.042 | 1.228 |
BXD010 | 1.067 | 2.436 |
BXD011 | 1.169 | 1.238 |
BXD03 | 0.243 | 0.094 |
BXD04 | 0.382 | 1.092 |
BXD05 | -0.188 | 1.537 |
BXD06 | 0.73 | 0.918 |
BXD07 | 1.112 | 0.965 |
BXD08 | 0.442 | 0.799 |
BXD09 | 0.434 | 2.116 |
CAST | -0.237 | -0.085 |
CCcont | 0.633 | 0.754 |
DS01 | 0.075 | -1.247 |
DS02 | -0.224 | 0.077 |
DS04 | -0.2 | 0.521 |
DS0c | -0.146 | 0.077 |
GP01 | -0.594 | -1.467 |
GP02 | 0.052 | -0.698 |
GP0c | -0.86 | -0.99 |
NOD | -0.775 | 1.058 |
NZO | 1.631 | 0.139 |
PWK | 0.789 | 0.831 |
H37Rv_KO_CtpC | 1.305 | 1.132 |
H37Rv_KO_CtpD | 1.835 | 1.384 |
H37Rv_KO_Rv1272 | 1.819 | 1.458 |
H37Rv_KO_SugABC | 1.368 | 1.626 |
H37Rv_KO_MbtN | 1.359 | 2.195 |
Trans05 | 1.569 | 1.174 |
macrophage_unactivated | 0.518 | 0.767 |
IL1 | 0.985 | 1.59 |
Rapamycin | 0.15 | 2.108 |
Tcell | -0.336 | 1.408 |
GMCSF | 0.375 | 0.826 |
IFNab | -0.076 | 0.466 |
IFNg | 0.78 | 0.2 |
IFNg_GMCSF1 | -0.408 | -0.135 |
Rv1432_day32 | 0.524 | 0.218 |
Rv1565c_day32 | 0.82 | 0.963 |
secA2_input | -0.204 | 0.235 |
delta_Rv3594 | 0.058 | -0.479 |
delta_Rv3717 | 0.273 | -0.063 |
delta_Rv3811 | -0.757 | -0.944 |
delta_Rv0954 | 0.704 | -0.182 |
PonA1 | 1.062 | -0.8 |
EccD1_KO | 0.0 | 1.0 |
EspI_KO | 0.736 | -0.904 |
PE35_KO | 0.543 | -0.615 |
PPE68_KO | 0.512 | 0.486 |
glycerol2 | -0.618 | -1.234 |
lignocerate | -0.415 | -1.03 |
oleate | -1.117 | 0.448 |
phosphatidylcholine | -0.618 | -0.812 |
acetate | 0.658 | -0.512 |
glucAc | 0.184 | -1.873 |
Rv0950ko | 0.684 | 0.645 |
Rv1096ko | 1.342 | 0.172 |
Rv3684ko | 0.829 | 2.06 |
delta_otsA_trehalose | -0.672 | -1.407 |