Top 10 genes with highest correlation to Rv0303/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0276/- | (cc=0.5835) | info on Rv0276/- |
| Rv0592/mce2D | (cc=0.5553) | info on Rv0592/mce2D |
| Rv3839/- | (cc=0.5345) | info on Rv3839/- |
| Rv0918/- | (cc=0.5206) | info on Rv0918/- |
| Rv2771c/- | (cc=0.5135) | info on Rv2771c/- |
| Rv0071/- | (cc=0.4974) | info on Rv0071/- |
| Rv3788/- | (cc=0.4881) | info on Rv3788/- |
| Rv3103c/- | (cc=0.4749) | info on Rv3103c/- |
| Rv1453/- | (cc=0.461) | info on Rv1453/- |
| Rv0233/nrdB | (cc=0.4576) | info on Rv0233/nrdB |
Correlation of Rv0303/- with Rv1453/-
Normalized LFCs for Rv0303/-:
(description and provenance of datasets)
| Rv0303/- | Rv1453/- | |
| Fe_supp_jason_reseq | 0.071 | 0.72 |
| low_pH_jason_reseq | -0.577 | 0.659 |
| NO_jason_reseq | -0.494 | -0.672 |
| B6_jason_reseq | 0.857 | 2.065 |
| MHCII_jason_reseq | -0.077 | 1.373 |
| Isoniazid02 | -0.162 | 1.302 |
| Rifampicin4 | -0.13 | 0.219 |
| Ethambutol3 | -0.206 | 0.876 |
| Meropenem3 | -0.156 | 0.7 |
| Vancomycin16 | -0.127 | 0.114 |
| Rv2680_day32 | 0.829 | 0.241 |
| H37Rv_KO_MarP | 0.241 | 0.793 |
| hypoxia_3wks | 0.136 | 0.905 |
| hypoxia_6wks | 0.66 | 1.054 |
| glycerol | -0.13 | -0.025 |
| cholesterol | -0.764 | -0.156 |
| AJ | -0.343 | 0.35 |
| Bibs02 | -0.65 | 0.738 |
| Bibs02c | 0.853 | 0.526 |
| BL6 | 0.246 | -1.143 |
| BL6a | 0.098 | -0.062 |
| BXD01 | -0.735 | -0.497 |
| BXD010 | -0.357 | -0.054 |
| BXD011 | -0.805 | -0.022 |
| BXD03 | -0.487 | -0.914 |
| BXD04 | -0.092 | -0.5 |
| BXD05 | -0.316 | -0.657 |
| BXD06 | -0.356 | -0.426 |
| BXD07 | -0.369 | -0.491 |
| BXD08 | -1.018 | -0.219 |
| BXD09 | -0.325 | -0.257 |
| CAST | 0.317 | -0.048 |
| CCcont | -0.969 | -1.652 |
| DS01 | -0.075 | 0.818 |
| DS02 | 0.325 | 0.756 |
| DS04 | 0.24 | 1.053 |
| DS0c | 0.239 | 1.053 |
| GP01 | -0.658 | -0.652 |
| GP02 | -1.356 | -1.909 |
| GP0c | -0.727 | -1.531 |
| NOD | 0.436 | 0.251 |
| NZO | -0.376 | 0.152 |
| PWK | 0.159 | 0.436 |
| H37Rv_KO_CtpC | -0.116 | -1.253 |
| H37Rv_KO_CtpD | 0.669 | 0.017 |
| H37Rv_KO_Rv1272 | 0.418 | -0.603 |
| H37Rv_KO_SugABC | -1.585 | -0.68 |
| H37Rv_KO_MbtN | -1.073 | -0.386 |
| Trans05 | -0.511 | -0.9 |
| macrophage_unactivated | -0.177 | -0.78 |
| IL1 | -0.092 | -0.528 |
| Rapamycin | -0.733 | -0.344 |
| Tcell | -0.287 | -0.261 |
| GMCSF | -0.301 | -0.232 |
| IFNab | -0.856 | -0.538 |
| IFNg | -0.083 | -0.794 |
| IFNg_GMCSF1 | -0.984 | -0.119 |
| Rv1432_day32 | 0.31 | 0.072 |
| Rv1565c_day32 | 0.028 | 0.264 |
| secA2_input | 0.554 | 0.41 |
| delta_Rv3594 | -0.58 | -0.118 |
| delta_Rv3717 | -0.312 | -1.099 |
| delta_Rv3811 | -0.739 | 0.079 |
| delta_Rv0954 | -0.868 | -0.846 |
| PonA1 | -0.119 | -0.374 |
| EccD1_KO | -0.197 | 0.503 |
| EspI_KO | -0.836 | -0.151 |
| PE35_KO | -0.744 | 0.277 |
| PPE68_KO | -0.733 | 0.336 |
| glycerol2 | -0.067 | 0.338 |
| lignocerate | -0.311 | 0.073 |
| oleate | 0.024 | 0.525 |
| phosphatidylcholine | -0.126 | 0.43 |
| acetate | -0.603 | -0.136 |
| glucAc | -0.315 | -0.174 |
| Rv0950ko | 0.651 | -0.32 |
| Rv1096ko | 1.095 | -0.787 |
| Rv3684ko | 0.956 | -0.331 |
| delta_otsA_trehalose | 1.464 | 1.851 |