Top 10 genes with highest correlation to Rv0303/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0276/- | (cc=0.5835) | info on Rv0276/- |
| Rv0592/mce2D | (cc=0.5553) | info on Rv0592/mce2D |
| Rv3839/- | (cc=0.5345) | info on Rv3839/- |
| Rv0918/- | (cc=0.5206) | info on Rv0918/- |
| Rv2771c/- | (cc=0.5135) | info on Rv2771c/- |
| Rv0071/- | (cc=0.4974) | info on Rv0071/- |
| Rv3788/- | (cc=0.4881) | info on Rv3788/- |
| Rv3103c/- | (cc=0.4749) | info on Rv3103c/- |
| Rv1453/- | (cc=0.461) | info on Rv1453/- |
| Rv0233/nrdB | (cc=0.4576) | info on Rv0233/nrdB |
Correlation of Rv0303/- with Rv0233/nrdB
Normalized LFCs for Rv0303/-:
(description and provenance of datasets)
| Rv0303/- | Rv0233/nrdB | |
| Fe_supp_jason_reseq | 0.071 | 0.2 |
| low_pH_jason_reseq | -0.577 | -0.095 |
| NO_jason_reseq | -0.494 | -0.131 |
| B6_jason_reseq | 0.857 | 0.854 |
| MHCII_jason_reseq | -0.077 | 1.421 |
| Isoniazid02 | -0.162 | 0.322 |
| Rifampicin4 | -0.13 | -0.192 |
| Ethambutol3 | -0.206 | 0.154 |
| Meropenem3 | -0.156 | 0.291 |
| Vancomycin16 | -0.127 | -0.443 |
| Rv2680_day32 | 0.829 | 0.614 |
| H37Rv_KO_MarP | 0.241 | 0.167 |
| hypoxia_3wks | 0.136 | -0.159 |
| hypoxia_6wks | 0.66 | 0.192 |
| glycerol | -0.13 | -0.973 |
| cholesterol | -0.764 | -0.39 |
| AJ | -0.343 | 0.316 |
| Bibs02 | -0.65 | 0.891 |
| Bibs02c | 0.853 | 0.543 |
| BL6 | 0.246 | -1.416 |
| BL6a | 0.098 | -0.575 |
| BXD01 | -0.735 | -0.696 |
| BXD010 | -0.357 | -0.537 |
| BXD011 | -0.805 | -0.693 |
| BXD03 | -0.487 | -1.509 |
| BXD04 | -0.092 | -0.539 |
| BXD05 | -0.316 | -0.41 |
| BXD06 | -0.356 | -0.887 |
| BXD07 | -0.369 | -1.157 |
| BXD08 | -1.018 | -0.354 |
| BXD09 | -0.325 | -0.919 |
| CAST | 0.317 | -0.038 |
| CCcont | -0.969 | -1.564 |
| DS01 | -0.075 | 1.025 |
| DS02 | 0.325 | 0.748 |
| DS04 | 0.24 | 0.933 |
| DS0c | 0.239 | 0.548 |
| GP01 | -0.658 | -0.911 |
| GP02 | -1.356 | -0.359 |
| GP0c | -0.727 | -0.382 |
| NOD | 0.436 | 0.605 |
| NZO | -0.376 | 0.12 |
| PWK | 0.159 | -0.242 |
| H37Rv_KO_CtpC | -0.116 | -1.19 |
| H37Rv_KO_CtpD | 0.669 | -0.803 |
| H37Rv_KO_Rv1272 | 0.418 | -0.626 |
| H37Rv_KO_SugABC | -1.585 | -0.316 |
| H37Rv_KO_MbtN | -1.073 | -0.755 |
| Trans05 | -0.511 | -0.13 |
| macrophage_unactivated | -0.177 | -1.083 |
| IL1 | -0.092 | -0.193 |
| Rapamycin | -0.733 | -0.786 |
| Tcell | -0.287 | -0.046 |
| GMCSF | -0.301 | 0.459 |
| IFNab | -0.856 | -0.478 |
| IFNg | -0.083 | 0.38 |
| IFNg_GMCSF1 | -0.984 | -0.396 |
| Rv1432_day32 | 0.31 | 0.042 |
| Rv1565c_day32 | 0.028 | 0.963 |
| secA2_input | 0.554 | 0.106 |
| delta_Rv3594 | -0.58 | -0.399 |
| delta_Rv3717 | -0.312 | -0.766 |
| delta_Rv3811 | -0.739 | -0.589 |
| delta_Rv0954 | -0.868 | -0.252 |
| PonA1 | -0.119 | -0.066 |
| EccD1_KO | -0.197 | -0.286 |
| EspI_KO | -0.836 | -0.368 |
| PE35_KO | -0.744 | -1.041 |
| PPE68_KO | -0.733 | -0.483 |
| glycerol2 | -0.067 | -0.911 |
| lignocerate | -0.311 | -0.609 |
| oleate | 0.024 | -0.404 |
| phosphatidylcholine | -0.126 | -0.598 |
| acetate | -0.603 | -1.107 |
| glucAc | -0.315 | -1.029 |
| Rv0950ko | 0.651 | 0.308 |
| Rv1096ko | 1.095 | 0.805 |
| Rv3684ko | 0.956 | 0.259 |
| delta_otsA_trehalose | 1.464 | 0.437 |