Top 10 genes with highest correlation to Rv0303/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0276/- | (cc=0.5835) | info on Rv0276/- |
| Rv0592/mce2D | (cc=0.5553) | info on Rv0592/mce2D |
| Rv3839/- | (cc=0.5345) | info on Rv3839/- |
| Rv0918/- | (cc=0.5206) | info on Rv0918/- |
| Rv2771c/- | (cc=0.5135) | info on Rv2771c/- |
| Rv0071/- | (cc=0.4974) | info on Rv0071/- |
| Rv3788/- | (cc=0.4881) | info on Rv3788/- |
| Rv3103c/- | (cc=0.4749) | info on Rv3103c/- |
| Rv1453/- | (cc=0.461) | info on Rv1453/- |
| Rv0233/nrdB | (cc=0.4576) | info on Rv0233/nrdB |
Correlation of Rv0303/- with Rv0276/-
Normalized LFCs for Rv0303/-:
(description and provenance of datasets)
| Rv0303/- | Rv0276/- | |
| Fe_supp_jason_reseq | 0.071 | -0.807 |
| low_pH_jason_reseq | -0.577 | -0.855 |
| NO_jason_reseq | -0.494 | -0.113 |
| B6_jason_reseq | 0.857 | 0.322 |
| MHCII_jason_reseq | -0.077 | 0.118 |
| Isoniazid02 | -0.162 | 0.141 |
| Rifampicin4 | -0.13 | -0.23 |
| Ethambutol3 | -0.206 | 0.238 |
| Meropenem3 | -0.156 | -0.272 |
| Vancomycin16 | -0.127 | 0.478 |
| Rv2680_day32 | 0.829 | 0.73 |
| H37Rv_KO_MarP | 0.241 | 0.452 |
| hypoxia_3wks | 0.136 | -0.12 |
| hypoxia_6wks | 0.66 | -0.194 |
| glycerol | -0.13 | -0.297 |
| cholesterol | -0.764 | 0.193 |
| AJ | -0.343 | 0.277 |
| Bibs02 | -0.65 | 0.335 |
| Bibs02c | 0.853 | 0.108 |
| BL6 | 0.246 | 0.3 |
| BL6a | 0.098 | 0.112 |
| BXD01 | -0.735 | -0.035 |
| BXD010 | -0.357 | -0.135 |
| BXD011 | -0.805 | 0.347 |
| BXD03 | -0.487 | -0.241 |
| BXD04 | -0.092 | 0.613 |
| BXD05 | -0.316 | 0.451 |
| BXD06 | -0.356 | -0.164 |
| BXD07 | -0.369 | 0.421 |
| BXD08 | -1.018 | -0.287 |
| BXD09 | -0.325 | 0.142 |
| CAST | 0.317 | 0.619 |
| CCcont | -0.969 | -0.211 |
| DS01 | -0.075 | 0.525 |
| DS02 | 0.325 | 0.714 |
| DS04 | 0.24 | 0.177 |
| DS0c | 0.239 | 0.187 |
| GP01 | -0.658 | 0.094 |
| GP02 | -1.356 | -1.435 |
| GP0c | -0.727 | -0.51 |
| NOD | 0.436 | 1.435 |
| NZO | -0.376 | -0.075 |
| PWK | 0.159 | 0.746 |
| H37Rv_KO_CtpC | -0.116 | 0.067 |
| H37Rv_KO_CtpD | 0.669 | -0.282 |
| H37Rv_KO_Rv1272 | 0.418 | 0.195 |
| H37Rv_KO_SugABC | -1.585 | -0.128 |
| H37Rv_KO_MbtN | -1.073 | -0.898 |
| Trans05 | -0.511 | 0.061 |
| macrophage_unactivated | -0.177 | 0.139 |
| IL1 | -0.092 | 0.706 |
| Rapamycin | -0.733 | -0.258 |
| Tcell | -0.287 | -0.098 |
| GMCSF | -0.301 | -0.201 |
| IFNab | -0.856 | 0.112 |
| IFNg | -0.083 | 0.174 |
| IFNg_GMCSF1 | -0.984 | 0.789 |
| Rv1432_day32 | 0.31 | -0.1 |
| Rv1565c_day32 | 0.028 | -0.046 |
| secA2_input | 0.554 | 0.928 |
| delta_Rv3594 | -0.58 | -0.441 |
| delta_Rv3717 | -0.312 | -0.622 |
| delta_Rv3811 | -0.739 | -0.669 |
| delta_Rv0954 | -0.868 | 0.557 |
| PonA1 | -0.119 | -0.44 |
| EccD1_KO | -0.197 | -0.26 |
| EspI_KO | -0.836 | -0.385 |
| PE35_KO | -0.744 | -0.738 |
| PPE68_KO | -0.733 | -0.618 |
| glycerol2 | -0.067 | 0.135 |
| lignocerate | -0.311 | 0.418 |
| oleate | 0.024 | 0.262 |
| phosphatidylcholine | -0.126 | 0.28 |
| acetate | -0.603 | -0.083 |
| glucAc | -0.315 | 0.051 |
| Rv0950ko | 0.651 | 1.604 |
| Rv1096ko | 1.095 | 1.514 |
| Rv3684ko | 0.956 | 1.837 |
| delta_otsA_trehalose | 1.464 | 1.079 |