Top 10 genes with highest correlation to Rv0259c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0060/- | (cc=0.4823) | info on Rv0060/- |
| Rv1805c/- | (cc=0.4463) | info on Rv1805c/- |
| Rv0445c/sigK | (cc=0.4419) | info on Rv0445c/sigK |
| Rv0314c/- | (cc=0.437) | info on Rv0314c/- |
| Rv3843c/- | (cc=0.4333) | info on Rv3843c/- |
| Rv2675c/- | (cc=0.4189) | info on Rv2675c/- |
| Rv3774/echA21 | (cc=0.4108) | info on Rv3774/echA21 |
| Rv2322c/rocD1 | (cc=0.4069) | info on Rv2322c/rocD1 |
| Rv0604/lpqO | (cc=0.3989) | info on Rv0604/lpqO |
| Rv3282/- | (cc=0.3959) | info on Rv3282/- |
Correlation of Rv0259c/- with Rv3843c/-
Normalized LFCs for Rv0259c/-:
(description and provenance of datasets)
| Rv0259c/- | Rv3843c/- | |
| Fe_supp_jason_reseq | 0.702 | 2.234 |
| low_pH_jason_reseq | -2.28 | -0.748 |
| NO_jason_reseq | 0.205 | -0.541 |
| B6_jason_reseq | 1.744 | 1.53 |
| MHCII_jason_reseq | 1.323 | 2.0 |
| Isoniazid02 | -0.541 | -4.41 |
| Rifampicin4 | -2.366 | -0.574 |
| Ethambutol3 | -0.731 | -3.491 |
| Meropenem3 | -1.047 | -3.533 |
| Vancomycin16 | -1.34 | -0.966 |
| Rv2680_day32 | 0.136 | -1.483 |
| H37Rv_KO_MarP | 0.087 | 0.162 |
| hypoxia_3wks | 0.586 | -0.514 |
| hypoxia_6wks | 1.023 | 0.758 |
| glycerol | 0.832 | 0.535 |
| cholesterol | -0.387 | -0.381 |
| AJ | -0.039 | -1.066 |
| Bibs02 | 0.415 | -0.652 |
| Bibs02c | 0.741 | 0.593 |
| BL6 | 0.502 | 0.029 |
| BL6a | 0.702 | -0.981 |
| BXD01 | 0.624 | -0.062 |
| BXD010 | -1.112 | 0.0 |
| BXD011 | -0.286 | -0.373 |
| BXD03 | -0.071 | -0.438 |
| BXD04 | -0.414 | -0.441 |
| BXD05 | -0.33 | -0.884 |
| BXD06 | -0.758 | -0.936 |
| BXD07 | 0.237 | -0.587 |
| BXD08 | -0.609 | -1.726 |
| BXD09 | -0.316 | -0.645 |
| CAST | 1.291 | -0.898 |
| CCcont | 1.018 | 0.285 |
| DS01 | -0.08 | -0.921 |
| DS02 | -0.232 | 0.537 |
| DS04 | 0.187 | -1.112 |
| DS0c | -1.43 | -1.425 |
| GP01 | -0.897 | -1.453 |
| GP02 | -1.075 | -1.308 |
| GP0c | -0.187 | 0.321 |
| NOD | -0.037 | -1.476 |
| NZO | 1.037 | -1.797 |
| PWK | 0.897 | -2.393 |
| H37Rv_KO_CtpC | 0.08 | -0.998 |
| H37Rv_KO_CtpD | 0.0 | -1.75 |
| H37Rv_KO_Rv1272 | -1.667 | -2.076 |
| H37Rv_KO_SugABC | -0.309 | -1.007 |
| H37Rv_KO_MbtN | -0.345 | -0.771 |
| Trans05 | -0.164 | 0.06 |
| macrophage_unactivated | 1.111 | -0.104 |
| IL1 | -0.092 | 0.095 |
| Rapamycin | -0.193 | -0.89 |
| Tcell | 1.45 | -0.945 |
| GMCSF | -0.338 | -0.177 |
| IFNab | -1.164 | 1.496 |
| IFNg | -0.342 | -1.109 |
| IFNg_GMCSF1 | -0.299 | -1.442 |
| Rv1432_day32 | 0.575 | -2.664 |
| Rv1565c_day32 | -1.339 | 0.0 |
| secA2_input | 0.554 | 0.144 |
| delta_Rv3594 | -0.965 | -2.207 |
| delta_Rv3717 | 0.618 | 0.234 |
| delta_Rv3811 | -0.17 | 0.382 |
| delta_Rv0954 | -1.008 | -1.032 |
| PonA1 | -1.984 | -3.042 |
| EccD1_KO | -0.194 | -1.098 |
| EspI_KO | -0.667 | -0.779 |
| PE35_KO | -1.21 | -1.26 |
| PPE68_KO | -0.486 | -2.332 |
| glycerol2 | 0.943 | 1.401 |
| lignocerate | 1.206 | 1.143 |
| oleate | 0.054 | -0.373 |
| phosphatidylcholine | 1.154 | 0.581 |
| acetate | 0.906 | 2.765 |
| glucAc | 1.902 | 1.153 |
| Rv0950ko | 0.908 | -1.764 |
| Rv1096ko | -0.127 | -1.764 |
| Rv3684ko | 0.517 | -2.05 |
| delta_otsA_trehalose | 0.578 | 1.306 |