Top 10 genes with highest correlation to Rv0259c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0060/- | (cc=0.4823) | info on Rv0060/- |
| Rv1805c/- | (cc=0.4463) | info on Rv1805c/- |
| Rv0445c/sigK | (cc=0.4419) | info on Rv0445c/sigK |
| Rv0314c/- | (cc=0.437) | info on Rv0314c/- |
| Rv3843c/- | (cc=0.4333) | info on Rv3843c/- |
| Rv2675c/- | (cc=0.4189) | info on Rv2675c/- |
| Rv3774/echA21 | (cc=0.4108) | info on Rv3774/echA21 |
| Rv2322c/rocD1 | (cc=0.4069) | info on Rv2322c/rocD1 |
| Rv0604/lpqO | (cc=0.3989) | info on Rv0604/lpqO |
| Rv3282/- | (cc=0.3959) | info on Rv3282/- |
Correlation of Rv0259c/- with Rv0314c/-
Normalized LFCs for Rv0259c/-:
(description and provenance of datasets)
| Rv0259c/- | Rv0314c/- | |
| Fe_supp_jason_reseq | 0.702 | 0.336 |
| low_pH_jason_reseq | -2.28 | -0.637 |
| NO_jason_reseq | 0.205 | -0.074 |
| B6_jason_reseq | 1.744 | -0.548 |
| MHCII_jason_reseq | 1.323 | 1.058 |
| Isoniazid02 | -0.541 | -1.561 |
| Rifampicin4 | -2.366 | -1.048 |
| Ethambutol3 | -0.731 | -0.263 |
| Meropenem3 | -1.047 | -2.337 |
| Vancomycin16 | -1.34 | -1.706 |
| Rv2680_day32 | 0.136 | 0.425 |
| H37Rv_KO_MarP | 0.087 | -0.631 |
| hypoxia_3wks | 0.586 | -0.267 |
| hypoxia_6wks | 1.023 | -0.048 |
| glycerol | 0.832 | -0.464 |
| cholesterol | -0.387 | -0.291 |
| AJ | -0.039 | 0.042 |
| Bibs02 | 0.415 | 0.179 |
| Bibs02c | 0.741 | 0.165 |
| BL6 | 0.502 | 0.603 |
| BL6a | 0.702 | -0.169 |
| BXD01 | 0.624 | -0.177 |
| BXD010 | -1.112 | -0.332 |
| BXD011 | -0.286 | -0.519 |
| BXD03 | -0.071 | 0.312 |
| BXD04 | -0.414 | -0.318 |
| BXD05 | -0.33 | -0.474 |
| BXD06 | -0.758 | -0.614 |
| BXD07 | 0.237 | 0.114 |
| BXD08 | -0.609 | -0.455 |
| BXD09 | -0.316 | -0.604 |
| CAST | 1.291 | -0.614 |
| CCcont | 1.018 | 0.257 |
| DS01 | -0.08 | -0.956 |
| DS02 | -0.232 | -0.38 |
| DS04 | 0.187 | -0.708 |
| DS0c | -1.43 | -0.305 |
| GP01 | -0.897 | -0.202 |
| GP02 | -1.075 | 0.66 |
| GP0c | -0.187 | -0.237 |
| NOD | -0.037 | 0.132 |
| NZO | 1.037 | 0.887 |
| PWK | 0.897 | 0.014 |
| H37Rv_KO_CtpC | 0.08 | 0.153 |
| H37Rv_KO_CtpD | 0.0 | -0.05 |
| H37Rv_KO_Rv1272 | -1.667 | -1.699 |
| H37Rv_KO_SugABC | -0.309 | -0.431 |
| H37Rv_KO_MbtN | -0.345 | -0.369 |
| Trans05 | -0.164 | -1.252 |
| macrophage_unactivated | 1.111 | 0.325 |
| IL1 | -0.092 | -0.329 |
| Rapamycin | -0.193 | -0.374 |
| Tcell | 1.45 | -0.502 |
| GMCSF | -0.338 | 0.602 |
| IFNab | -1.164 | -0.599 |
| IFNg | -0.342 | -0.091 |
| IFNg_GMCSF1 | -0.299 | 0.239 |
| Rv1432_day32 | 0.575 | -0.433 |
| Rv1565c_day32 | -1.339 | 0.507 |
| secA2_input | 0.554 | 0.651 |
| delta_Rv3594 | -0.965 | -0.528 |
| delta_Rv3717 | 0.618 | -0.346 |
| delta_Rv3811 | -0.17 | 0.079 |
| delta_Rv0954 | -1.008 | 0.488 |
| PonA1 | -1.984 | -0.412 |
| EccD1_KO | -0.194 | 0.253 |
| EspI_KO | -0.667 | 0.128 |
| PE35_KO | -1.21 | 0.125 |
| PPE68_KO | -0.486 | 0.128 |
| glycerol2 | 0.943 | 0.722 |
| lignocerate | 1.206 | 0.943 |
| oleate | 0.054 | 0.098 |
| phosphatidylcholine | 1.154 | 0.852 |
| acetate | 0.906 | 0.045 |
| glucAc | 1.902 | 0.18 |
| Rv0950ko | 0.908 | 0.781 |
| Rv1096ko | -0.127 | 0.618 |
| Rv3684ko | 0.517 | 0.55 |
| delta_otsA_trehalose | 0.578 | 0.222 |